Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0691 ATGGCATCGGCTTCCCCTTCTCCGAAATCTTCCCCTTCTGCAGAGCCACCAACTTCTGCTAGTACTTCACCACCACCCCCTTCTTCACCTTCCTCTACGAATTCTTCCAATACATCACCACCTCCCACTTCCTCTAATACTCCTCCTTCTTCATCTCCTTCTCCTCCTCAGGATGTGCCTTCAACCGCGCCTCCTTCCCCGTCTCTTTCTCCTCCGTCGCCTTCGTCAACTCCGCGGTCATCACCACCAGATTCTCCACCGGCATCTCCCCCGCCGTCAGCTACCACCGCCCCTCCTCCAGCTGAAACCTCACCTGCCTCCCCAAATTTATCCCCACCTCCTCCAGTTGCTGCTTCACCTCCTCCCCAAGCCTCAAATGCACCTCCTGCTGAAAATCCGCCTCCCTCTAAACCCATTTCTCCAAGTCCTACTCCTCCTGCCAAAGTCCCAACGCCACCATCTCCTTCTCCACCGCAGGGAAAGCCACCGGCAAGTACTCCTTCACTTACACCGCCTCCATCTGGTTCTAAGTCTCCTCCTTCCACAAATGCGCCCCCTCCTTCCACATCGCCATCAACGCCTTCAACCTCTTCCCCTCCTCCAACCAGTCCATCTGCAGTTGGGGGTCCCCCTGCGCCCCTACCCTCTATTGCAACAGAGAAACCCACTGCTAAATCAACTAATGGTACAGATACATCCAGAAACGGCACATCTTCACCTTCAGGAGGGTTAAATACTGGAAGAATCGCAATTATTGGCATTGTCGTTGGTTTTGTTGTACTCAGCCTTCTACTTATGGCCGTGTGGTTTGTACGGAAACGGAAGAGGAAGGAAACAAAAGTTGGTTACACTATGCCTTCTCCATATGCCTCGTCTCAAAATTCGGGAACAATGTTCTTGAGGTCACAGTCTCCCCTTCTACATAATGGCTCTGGTAGCGATTTTGTGTATTCACCATCAGATCCAGGTGGAGTAAGTAATTCGAGATCATGGTTCACGTATGAAGAACTTGTCCAGGCAACAAATGGGTTTTCGGCACAAAATCTGTTGGGTGAAGGTGGATTTGGTTGTGTCTACAAAGGCTATCTCATAGATGGAAGAGAAGTGGCTGTGAAACAGCTCAAAGATGAAGGTGGGCAAGGAGAGCGTGAGTTTAGAGCAGAAGTTGAAATTATTAGCCGAGTACATCATCGCCACCTTGTTTCCTTGGTGGGCTACTGTGTATCTGAGGATCAGAGATTGCTTGTCTATGACTATGTTCCAAACAATACCCTTCATTACCATCTCCATGGTGAAGGCAGGCCAGTTATGGATTGGGCTACCAGACTCAAGGTTGCAGTTGGTGCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATTATCCACCGAGACATAAAGTCATCAAACATCCTTCTTGATAACAACTTTGAAGCTCAAGTTTCTGACTTTGGGCTTGCAAAATTAGCATTGGATTCATATACACATGTAACCACACGTGTAATGGGAACCTTTGGGTACCTGGCACCAGAGTACGCAACTAGTGGCAAATTGACTGAAAAATCTGATGTTTATTCCTTTGGGGTTGTGCTTTTGGAGCTAATTACTGGTCGGAAGCCTGTAGATGCCTCTCAGCCCATTGGTGATGAGAGCCTGGCTGAATGGGCTCGACCTTTGTTGATTCAAGTGCTTGATGATGAAGACTATGACATATTGGCAGATCCAAGACTAGAGAAGAACTATAATAGAAATGAAGTGTTTCGGATGGTAGAGGCTGCCGCTGCTTGTGTACGTCACTCTGCAGCGAAAAGGCCACGGATGAGTCAGGTTGTGAGAGCTTTGGATTCATCAGATGAATTTTTAGATCTCAGTAATGGAATGAAACCTGGCCAGAGTACAATCGTGGATTCTTCAGTGCCATCTGCACAAGTCAGAATATTTAGAAGGATGGTTTTGGGGTTCGGCAGCCAAGATTACAGTTCAAGTTTCTTTAATGATTCTCAGAGTAGCTGGAGGAGCAGAGAGCAGGAGGACTCAAACATCATGACACCCCAAAATAAAGAGATACAACTTCTTTGA 2088 0.4804 MASASPSPKSSPSAEPPTSASTSPPPPSSPSSTNSSNTSPPPTSSNTPPSSSPSPPQDVPSTAPPSPSLSPPSPSSTPRSSPPDSPPASPPPSATTAPPPAETSPASPNLSPPPPVAASPPPQASNAPPAENPPPSKPISPSPTPPAKVPTPPSPSPPQGKPPASTPSLTPPPSGSKSPPSTNAPPPSTSPSTPSTSSPPPTSPSAVGGPPAPLPSIATEKPTAKSTNGTDTSRNGTSSPSGGLNTGRIAIIGIVVGFVVLSLLLMAVWFVRKRKRKETKVGYTMPSPYASSQNSGTMFLRSQSPLLHNGSGSDFVYSPSDPGGVSNSRSWFTYEELVQATNGFSAQNLLGEGGFGCVYKGYLIDGREVAVKQLKDEGGQGEREFRAEVEIISRVHHRHLVSLVGYCVSEDQRLLVYDYVPNNTLHYHLHGEGRPVMDWATRLKVAVGAARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLALDSYTHVTTRVMGTFGYLAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESLAEWARPLLIQVLDDEDYDILADPRLEKNYNRNEVFRMVEAAAACVRHSAAKRPRMSQVVRALDSSDEFLDLSNGMKPGQSTIVDSSVPSAQVRIFRRMVLGFGSQDYSSSFFNDSQSSWRSREQEDSNIMTPQNKEIQLL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0691 695 MobiDBLite consensus disorder prediction 1 246 - -
Dere06g0691 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Dere06g0691 695 FunFam Proline-rich receptor-like protein kinase PERK8 317 419 - -
Dere06g0691 695 Gene3D Phosphorylase Kinase; domain 1 322 419 - -
Dere06g0691 695 SUPERFAMILY Protein kinase-like (PK-like) 322 617 IPR011009 -
Dere06g0691 695 SMART serkin_6 344 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0691 695 MobiDBLite consensus disorder prediction 664 688 - -
Dere06g0691 695 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 258 663 IPR047117 -
Dere06g0691 695 FunFam proline-rich receptor-like protein kinase PERK8 420 632 - -
Dere06g0691 695 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Dere06g0691 695 MobiDBLite consensus disorder prediction 10 31 - -
Dere06g0691 695 CDD STKc_IRAK 350 618 - -
Dere06g0691 695 Gene3D Transferase(Phosphotransferase) domain 1 420 629 - -
Dere06g0691 695 MobiDBLite consensus disorder prediction 220 245 - -
Dere06g0691 695 ProSiteProfiles Protein kinase domain profile. 344 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0691 695 Pfam Protein tyrosine and serine/threonine kinase 347 617 IPR001245 GO:0004672|GO:0006468
Dere06g0691 695 MobiDBLite consensus disorder prediction 42 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0691 Dere-ChrDere06 11478903 11484476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0691 147 679 Trihelix Transcription Factor Family AT5G38560 64.351 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dere06g0691 PK_Tyr_Ser-Thr 6.6e-47 CL0016