Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0656 ATGGCGGCCACTCGGGTGGCTTCTTCTCTTTTCCTGTTAATTGCCTCGATCTTAGTTGGTCTTCATCTTGCTCTAGCCAACACTGACCCTACTGATGTTCAAGCACTTGAAGTTTTGTACAACGCTTTAAACAGTCCTTCTTGGCTAACCGGCTGGAAAATTGGTGGCGGTGATCCTTGTGGAGAGTCATGGAAAGGGATAACATGTGAGGGCTCGGCCGTTGTTTCCATTGAACTCTCAGGTTTGGGACTCAATGGGACTCTGGGATACCTGCTTTCGGACCTTATGTCACTGAGACAACTTGACTTAAGTGACAATAAGATCCATGACACTCTCCCCTACCAGTTGCCGCCGAATCTGACAAGCCTGAACCTTGCAAGCAATAACTTAAGTGGAAATCTTCCTTATTCCATTTCTGCCATGGCTTCCCTCAATTATCTGAATGTAAGCCACAATTCACTCTCCCTCTCAATTGGAGACATTTTTGCTGGCCTTGCTGATCTTGGTACCCTGGATCTATCATTCAACGACTTTTCTGGGGATCTTCCTACTTCATTCAGTTCATTATCAAATCTTTCTTCTCTCTTTTTGCAGAACAATCAGTTGACTGGTTCTCTTAGTGCTCTTGTTGGTTTGCCTTTAGATACTTTAAATGTTGCAAACAACAATTTCAGTGGATGGATACCTCATGAGCTTAGCTCAATTCATAATTTCATATTTGATGGAAATTCTTTTGACAATGGCCCTGCTCCTCCTCCGCCACCACATACATCACCTCCACGTAGCAGATCTCAAGATAACCATCACCATTCTGGATCTCGTTCTCATAAAACTCAGGGCTCTGAATCTGGCAGTGCAAATTCTGATAGCCATAAGGATTTGACATCTGGTGCTATTATAGGCATTATTTTGAGTTCAGTGTTTCTGGCTGTTTTTGTGCTACTTGCTCTCGTTTTCTGTATCCGAAAGCAAAAAAAGAAGGAACAAGGTGTAAGAACTTCCAATGGGAGTCTTCCACTTGGAACAAATAATGTAATTCCTCAGATGCAAGAGCAGAGGGTAAAAAGTGCTGCTATTGTTACAGATCTGAAGCCCCCTCCTGCAGAAAAAGTGATAGCTGAGAGGGTTCCTTCCAAAAATGGATCTGTTAAGCGGATAAAATCCCCTATAACTGCTACATCATACACAGTTGCTTCTCTCCAAAGTGCAACAAATAGCTTCAGTCAAGAATTTATTATTGGTGAAGGTTCTCTAGGGCGTGTTTACAGGGCTGAATTCCCTTCTGGGAAGATCATGGCTATTAAGAAGATCGACAATGCAGCACTGTCATTGCAGGAGGAAGACAACTTTCTTGAAGCTGTTTCAAATATGTCACGGTTGCGGCATCCAAACATTGTTACACTGGCTGGATACTGTGCAGAGCATGGGCAGCGTCTTCTAGTTTATGAGTACATAGGAAATGGAAATCTACATGATATGCTCCATTTTGCTGAAGATAGCAGCAAGGCTTTATCTTGGAATGCCCGTGTACGAATAGCACTTGGCACAGCTCGGGCTTTAGAGTACTTGCATGAAGTGTGCTTGCCTTCTGTCGTGCATAGAAACTTTAAATCGGCAAACATATTACTTGATGAGGAGTTGAATCCTCACCTGTCTGACTGTGGTTTAGCTGCTTTAACACCTAACACTGAGCGGCAGGTTTCAACTCAGATGGTTGGTTCATTTGGTTATAGTGCTCCTGAGTTTGCACTATCAGGAATTTACACAGTAAAAAGTGATGTCTACAGCTTTGGAGTGGTAATGTTAGAGCTATTGACAGGTCGGAAGCCACTTGACAGTTCCCGGGCCAGATCAGAGCAATCGCTTGTGAGGTGGGCTACTCCCCAGCTCCATGATATAGATGCCTTGGCCAAGATGGTTGATCCTGCTTTGAATGGCATGTATCCTGCTAAGTCACTGTCACGCTTTGCTGATATCATTGCCCTCTGTGTTCAGCCGGAACCTGAATTTCGACCTCCCATGTCTGAGGTTGTGCAAGCATTGGTACGGTTAGTGCAAAGAGCGAGTGTGGTCAAACGGCGTCCCAGCGATGAATCTGGGTTTGGTCACAAGACCCCAGATCATGAGGCCATGGACATGTCATTTTAA 2148 0.4427 MAATRVASSLFLLIASILVGLHLALANTDPTDVQALEVLYNALNSPSWLTGWKIGGGDPCGESWKGITCEGSAVVSIELSGLGLNGTLGYLLSDLMSLRQLDLSDNKIHDTLPYQLPPNLTSLNLASNNLSGNLPYSISAMASLNYLNVSHNSLSLSIGDIFAGLADLGTLDLSFNDFSGDLPTSFSSLSNLSSLFLQNNQLTGSLSALVGLPLDTLNVANNNFSGWIPHELSSIHNFIFDGNSFDNGPAPPPPPHTSPPRSRSQDNHHHSGSRSHKTQGSESGSANSDSHKDLTSGAIIGIILSSVFLAVFVLLALVFCIRKQKKKEQGVRTSNGSLPLGTNNVIPQMQEQRVKSAAIVTDLKPPPAEKVIAERVPSKNGSVKRIKSPITATSYTVASLQSATNSFSQEFIIGEGSLGRVYRAEFPSGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIGNGNLHDMLHFAEDSSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGFGHKTPDHEAMDMSF 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0656 715 MobiDBLite consensus disorder prediction 244 291 - -
Dere06g0656 715 MobiDBLite consensus disorder prediction 695 715 - -
Dere06g0656 715 Pfam Protein kinase domain 410 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0656 715 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Dere06g0656 715 Gene3D Transferase(Phosphotransferase) domain 1 485 702 - -
Dere06g0656 715 SUPERFAMILY Protein kinase-like (PK-like) 384 681 IPR011009 -
Dere06g0656 715 Gene3D Ribonuclease Inhibitor 29 261 IPR032675 -
Dere06g0656 715 ProSiteProfiles Leucine-rich repeat profile. 191 213 IPR001611 GO:0005515
Dere06g0656 715 ProSiteProfiles Protein kinase domain profile. 407 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0656 715 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Dere06g0656 715 MobiDBLite consensus disorder prediction 277 291 - -
Dere06g0656 715 MobiDBLite consensus disorder prediction 262 276 - -
Dere06g0656 715 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 685 IPR046959 -
Dere06g0656 715 SUPERFAMILY L domain-like 29 237 - -
Dere06g0656 715 CDD STKc_IRAK 413 684 - -
Dere06g0656 715 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 256 - -
Dere06g0656 715 ProSiteProfiles Leucine-rich repeat profile. 97 118 IPR001611 GO:0005515
Dere06g0656 715 Gene3D Phosphorylase Kinase; domain 1 369 484 - -
Dere06g0656 715 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 485 695 - -
Dere06g0656 715 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 373 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0656 Dere-ChrDere06 10766131 10772136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0656 141 715 Strubbelig Receptor Gene Family AT4G22130 73.657 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Dere06g0656 Pkinase 1.9e-44 CL0016