Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0652 ATGACCACAAAACCAAACATAAAATTCTTGGTTTTCCTTTTCTTTCTGACTGTGATTCTCAGAGCCGAAGCTAACTGTAGGTCCGGTTGCAAGCTTGCTTTAGCTTCGTATTACGTCTGGGACGGCACAAATCTCACATACATTAGCAAAATCTTCGGCCACAATATCGCTGAAATTCTCAAATACAATCCAGCAATCTTGAACCCCGATTTTGTTCCGAGCCAGACCCGAATCAACGTGCCGTTCTCGTGCGAATGCTTGAACGGCGTCTTCTTAGGTCACACTTTCTCTTACACAACCCAACCTAGCGATACGTACCATAATATTGCTCGGATTGCTTTTTCTAACCTTACGACCGACGAATGGGTGGAGAGGGTGAACATGTATGAACCTACAGAGATACCGAACGGCGTTGAGATTAACGTCACCGTCAATTGCTCGTGCGGCGACAGTCACGTGTCGAGGGATTATGGACTGTTTTTGACGTACCCGCTTCGGCCCGGTGATAACTTGCCGGAAGTTGCGGCGGCGGCCGGCGTGTCGGCGGAGGTCGTACAGAGGTATAATCCCACCTCCGATTTCAGCGCCGGGAGTGGGCTGGTGTTTGTGCCGGCGAAAGATGATAAAGGAAGCTTTTTACCTCTGCAGCTGAGATCAGGTGAGTGGACATTATGCGCACCGTTTTACTGATTATCTGGGGGAGCCATTGCTGGAATCACTGTTGGAGCTGTTGCTGGGGCTTTGCTATTGGTACTTGTCCTGTATGTTGCTCTATACAGAAGAAGGAAAGTGGCAGAGGTGTCCCTTCTACCTGGAGCATCTGAAGATCACTTTCTTCAAACCGGACAAGGTTCTGGACATAGCTTGGAGAAGGTGTCAGAATCTGTTGATGCTGCTTCTCCAAGGTTGACAGGAATCACAGTGGACAAGTCAGTGGAGTTCTCATATGAGGAGCTTGCCAAAGCTACTGATGGTTTTTGTATAGCTAAGAAGATTGGTCAAGGTGGCTTTGGATCTGTTTACTATGCAGAGCTACGAAATGAGAAAGCTGCAATTAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCAGAGCTTAAGGTTCTCACACACGTCCACCACTTGAACTTGGTACGCTTAATAGGATATTGTGTTGAGAGCTCCTTATTTTTGGTCTATGAATACATTGAGAATGGAAATTTAAGTCAACATTTACGTGGCTCAGGAAGAGAAACCTTATCATGGCCAGCTAGAATTCAAATTGCCTTGGATGCAGCAAGAGGACTCGAATACATCCACGAGCATACAGTTCCTGTCTACATTCATCGAGACATTAAATCTGCAAACATTTTGATTGATAAGAATTTTCGTGGAAAGGTTGCAGATTTTGGTCTGGCAAAACTTACTGAATATGGAAGTTATTCACTGCAAACAAGACTTGTGGGTACATTTGGCTATATCCCTCCAGAATATGCACAATACGGTGACGTTTCCCCCAAGATAGATGTATATGCTTTTGGAGTAGTCATGTACGAACTGATATCAGCCAAGGAAGCTATTGTGAAGACAAACGAGCCTGAGAATGAATCAAAAGGACTAGTTGCCTTGTTTGAAGAGGTTCCAAGGCAGCCAGATCAGAAAGATGATCTTCGCAAACTTGTTGATCCTAGGCTTGGTGACAACTACCCTCTTGAATCAGTATATAAGATGTCTCAGCTTGCCAAAGCTTGCACACATGAGAATCCTCAATTAAGGCCAAGCATGAGATCAATTGTAGTTGCACTAATGACACTTTCTTCTCCAACTGAGGACTGGGATGTTGGCTCCATCTATGAAAACCAAGCTATGATGCATCTAATGGCAGGAAGGTAG 1875 0.4485 MTTKPNIKFLVFLFFLTVILRAEANCRSGCKLALASYYVWDGTNLTYISKIFGHNIAEILKYNPAILNPDFVPSQTRINVPFSCECLNGVFLGHTFSYTTQPSDTYHNIARIAFSNLTTDEWVERVNMYEPTEIPNGVEINVTVNCSCGDSHVSRDYGLFLTYPLRPGDNLPEVAAAAGVSAEVVQRYNPTSDFSAGSGLVFVPAKDDKGSFLPLQLRSGEWTLCAPFYXLSGGAIAGITVGAVAGALLLVLVLYVALYRRRKVAEVSLLPGASEDHFLQTGQGSGHSLEKVSESVDAASPRLTGITVDKSVEFSYEELAKATDGFCIAKKIGQGGFGSVYYAELRNEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVESSLFLVYEYIENGNLSQHLRGSGRETLSWPARIQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLAKLTEYGSYSLQTRLVGTFGYIPPEYAQYGDVSPKIDVYAFGVVMYELISAKEAIVKTNEPENESKGLVALFEEVPRQPDQKDDLRKLVDPRLGDNYPLESVYKMSQLAKACTHENPQLRPSMRSIVVALMTLSSPTEDWDVGSIYENQAMMHLMAGR 624
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0652 624 Pfam Protein tyrosine and serine/threonine kinase 328 595 IPR001245 GO:0004672|GO:0006468
Dere06g0652 624 CDD STKc_IRAK 332 593 - -
Dere06g0652 624 Gene3D Transferase(Phosphotransferase) domain 1 397 606 - -
Dere06g0652 624 FunFam PTI1-like tyrosine-protein kinase 3 397 610 - -
Dere06g0652 624 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 610 IPR044812 GO:0019199|GO:0045087
Dere06g0652 624 SUPERFAMILY Protein kinase-like (PK-like) 305 596 IPR011009 -
Dere06g0652 624 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Dere06g0652 624 Gene3D Phosphorylase Kinase; domain 1 311 396 - -
Dere06g0652 624 FunFam LysM receptor kinase 2 305 396 - -
Dere06g0652 624 ProSiteProfiles Protein kinase domain profile. 326 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0652 624 SMART serkin_6 326 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0652 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere06g0652 Dere-ChrDere06 10724771 10734391 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0652 9 624 Receptor kinase-like Gene Family AT3G21630 55.255 0.0 675
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dere06g0652 PK_Tyr_Ser-Thr 2.8e-47 CL0016