Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0646 ATGCTTCCTGCTTTGGGATTTCCAGTGAATCTTGGCCACGTGAAGGATTCTTCTGATGATAATCGGAAGGTCCTCAGCGAAGTGGACTTCTTCTCCAACACAAACAAGTTATCAGAAATTGATCATGACGTTAAAACTCATATGAGCATCGCTGTAAAGAAGGAAATTTCTCAGGCCCATCCACTTCCTAAGTCTAATTTGGATGTAAATACTGGTTTACAACTCCACACTGGTAACACCGGGAGTGATCAATCTACGGTGGAAGATCATGGGGTCTCTTCAGATGCAGAAGACAAGCGAGCCAAGAGTACTACCGAGTTGAAACAACTGCAAGAAGAGCTTCATCGAATAAATGCAGAAAATCAGAACCTGAAAAAGATGCTGACCCATGTGAGCAGTAACTACACCGCCTTGCAAATGCATCTCGCGGCTTTGATCGAACAGCGACGACAGAACCAACGTGCCCACACCACACAACGCGATCATCAGGTTGTCGGAAAAGGTGAGGAGAAGAAACAGGTGGCGAGGCGGTTTCTTGAGTTGGGAGGTGCTAGTGGCGAAGTGAAGGTTGATGATGAAGTATCGAATTCTTGTTCGGATGAAAGAACTCGATCTGGTTCGCCTCAGAACAACAATAATGGTAAGAGTGGCATTGGTAGGGAAGAAAGTCCAGACTCAGAATCACAACAACGTTACAATAAGCTTCAGAAACTGAATCCTTCTTCGAATTCCATGGATCAATCCGCAGCAGCTACAGAAGCCACCATGAGAAAAGCTCGTGTCTCAGTTCGTGCTAGATCAGAAGCTCCCATGATCAGCGATGGGTGCCAATGGCGAAAGTATGGACAAAAAATGGCCAAGGGAAACCCATGTCCTCGTGCTTATTACAGATGCACCATGGCTGTTGGTTGCCCAGTTCGCAAACAAGTTCAGCGTTGTGCAGAAGACAGAAGCATATTGATAACAACGTATGAAGGAAGCCATAATCATCCATTGCCACCTGCAGCTATGGCGATGGCTTCAACTACGAGTGCAGCGGCTAGCATGTTGCTATCTGGGTCAATGTCAAGTGGGGAAGGAGGAGTGATGAACATGAACCCAAATTTGCTAGCCAGAGCCATTCTTAACCCTTGCTCTTCTTCGAACATGGCTACACTTTCTGCTTCAGCACCATTCCCTACTGTGACATTGGACCTCACTCACAACATGAACAACAACAACAACAACAACTCAAACCCAAATCCATTGCAGTTCCAGAGGCCTCCTGCGGCACCGTTTGAGTTGAGTCAGGCATTTTCACAAACACTTCATAATCAATCCAAGTTCTCTGGCCTTCACTTGTCTCATGACAGGCCGAGCCAGCAATCCTCCCTGGCGGACACCGTGAGCGCCGTCACCGCCGACCCGAACTTCACGGCGGCTCTCGCCGCCGCTATCTCCTCCATCATCGGCGGTGCTCATCAGAACAGCAACGGTAGCAGCATCAATCCAAATGTCCTCAACAGTACTACAATAAGCGGCTTTTCTGGGAATTGA 1536 0.4772 MLPALGFPVNLGHVKDSSDDNRKVLSEVDFFSNTNKLSEIDHDVKTHMSIAVKKEISQAHPLPKSNLDVNTGLQLHTGNTGSDQSTVEDHGVSSDAEDKRAKSTTELKQLQEELHRINAENQNLKKMLTHVSSNYTALQMHLAALIEQRRQNQRAHTTQRDHQVVGKGEEKKQVARRFLELGGASGEVKVDDEVSNSCSDERTRSGSPQNNNNGKSGIGREESPDSESQQRYNKLQKLNPSSNSMDQSAAATEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRSILITTYEGSHNHPLPPAAMAMASTTSAAASMLLSGSMSSGEGGVMNMNPNLLARAILNPCSSSNMATLSASAPFPTVTLDLTHNMNNNNNNNSNPNPLQFQRPPAAPFELSQAFSQTLHNQSKFSGLHLSHDRPSQQSSLADTVSAVTADPNFTAALAAAISSIIGGAHQNSNGSSINPNVLNSTTISGFSGN 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0646 511 MobiDBLite consensus disorder prediction 489 511 - -
Dere06g0646 511 MobiDBLite consensus disorder prediction 153 171 - -
Dere06g0646 511 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 71 494 IPR044810 GO:0003700
Dere06g0646 511 FunFam probable WRKY transcription factor 31 257 334 - -
Dere06g0646 511 Gene3D WRKY domain 257 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere06g0646 511 MobiDBLite consensus disorder prediction 63 89 - -
Dere06g0646 511 MobiDBLite consensus disorder prediction 149 171 - -
Dere06g0646 511 MobiDBLite consensus disorder prediction 61 103 - -
Dere06g0646 511 Pfam WRKY DNA -binding domain 274 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere06g0646 511 MobiDBLite consensus disorder prediction 200 219 - -
Dere06g0646 511 MobiDBLite consensus disorder prediction 229 251 - -
Dere06g0646 511 ProSiteProfiles WRKY domain profile. 267 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere06g0646 511 SMART WRKY_cls 272 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere06g0646 511 SUPERFAMILY WRKY DNA-binding domain 265 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere06g0646 511 Coils Coil 93 127 - -
Dere06g0646 511 MobiDBLite consensus disorder prediction 189 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0646 Dere-ChrDere06 10648463 10650555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0646 7 496 WRKY Transcription Factor Family AT1G62300 53.259 9.23e-150 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere06g0646 WRKY 3.4e-24 CL0274