Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0644 ATGGACTGGACTAGGGGCCCCACCCTCGGCCGTGGTTCCACCGCCACCGTCTCAGTCGCCGAGGACCGCCGGTCCTGCAACGTGTTTGCCGTCAAGTCTGTCCAGCTCCACCAGTCGGAGTTCCTCCAAAGGGAACAGAAAATTCTCTCAACATTGAAGTGTCCTCAGGTTGTAGCATACAAAGGTTACGACGTTACATCAGAGAATAATGTACTATGGTACAATCTGTTCATGGAATATGCTCCTTATGGTACGCTCGCCGACGCGACTCGCCGGCGAAACGGGCTAGATGAGGTCGTGGTTCGAACCTATGCACGCCAAATCCTGCTTGGGCTGAACCATCTTCATTCTAATGGCATAGTGCATTGTGATATTAAAGGTAAGAATGTTCTGGTCACTGAGGAGGGGGCTAAAATTGCAGACTTGGGTTGTGCTCGGAGGGTCAATGAGGCAGCGGATTGCCGCGGAGTCGTTGCCGGTACACCGGTGTTCATGGCTCCGGAGGTGGCGCGTGGGGAGCAACAGGGGTTCCCTGCCGACGTGTGGTCTCTGGGGTGCACTGTGTTGGAGATAATCACTGGGCAGGCTCCGTGGCCGGACGTATCCGAATCGGTTAGTGCAATTTACCGGATCGGGTTCTCCGGCGATGTGCCGGAGATTCCGGGGTTTGTGTCGGAGCAATGCAGGGACTTTGTGAGCAAGTGCTTGAAGAGAGACCCGAAAGAGAGGTGGTCGGTGGGTGAACTTCTCAGACATGGTTTCGTTGAAGAATCGACTTCGATCATGAAGGAATTCGGAAGCTCGAATTCGGATACTCCGACGAGTGTAATGGATAGGACCATTTGGGACACGTTGGAGAGAAACCAGGATCCGACCCGTAATTGTGCCTGGAATTCCGCTAGAGACAGGATTCGTAGGTTGTGTGCGGAAGCTACGACGTCGTTTGATGCTAATGATCGATGGGATGCAAAGTGGATTACAGTTAGAAGCAATGGGACTACAGAGTGTGACAAAGAAACAGAGACTTGTGGGTCAGACGATGTTTACGTTAGGAAGGAGGAAAGTTCGAAACTTTCTTGTGAGTCCAAAACAGTAATTTCCAGTGGGTTGTGTTGTTGTAATGTCAATTGTGAGGTTAGATGCCACAGCAGTGATTACAGTTATAACAGAGGATTAGTGTCTGGTTATTCTTGTTCATGTATAAAGATTATTGTTCTCAAAGGCAAAATTGAAGCTCAAAACAAGGAAATATTTTTCATGATTTGCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTGCCATTATAGGTTATAATGGGTTCACATGTGCCCAACATAAGGGTTAA 1347 0.4929 MDWTRGPTLGRGSTATVSVAEDRRSCNVFAVKSVQLHQSEFLQREQKILSTLKCPQVVAYKGYDVTSENNVLWYNLFMEYAPYGTLADATRRRNGLDEVVVRTYARQILLGLNHLHSNGIVHCDIKGKNVLVTEEGAKIADLGCARRVNEAADCRGVVAGTPVFMAPEVARGEQQGFPADVWSLGCTVLEIITGQAPWPDVSESVSAIYRIGFSGDVPEIPGFVSEQCRDFVSKCLKRDPKERWSVGELLRHGFVEESTSIMKEFGSSNSDTPTSVMDRTIWDTLERNQDPTRNCAWNSARDRIRRLCAEATTSFDANDRWDAKWITVRSNGTTECDKETETCGSDDVYVRKEESSKLSCESKTVISSGLCCCNVNCEVRCHSSDYSYNRGLVSGYSCSCIKIIVLKGKIEAQNKEIFFMICFSLSLSLSLSIAIIGYNGFTCAQHKG 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0644 448 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0644 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Dere06g0644 448 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 339 - -
Dere06g0644 448 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Dere06g0644 448 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0644 448 SUPERFAMILY Protein kinase-like (PK-like) 2 280 IPR011009 -
Dere06g0644 448 Pfam Protein kinase domain 6 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0644 448 Gene3D Transferase(Phosphotransferase) domain 1 2 344 - -
Dere06g0644 448 CDD STKc_MAPKKK 2 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0644 Dere-ChrDere06 10629558 10630904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0644 2 343 MAP Kinase Kinase Kinase AT5G55090 46.111 1.30e-105 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dere06g0644 Pkinase 9.2e-55 CL0016