Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0625 ATGCGAACCTTGCCGACGTGGCATCCTTACAACGTTCGACTCTTACGAAATACCGCCTTCAAGCCAAACAAACTTCAAAGAAAGACTATAATGAAGAAGAGTTCTCAAGCTAAAAGCTCTCTCAGTCTCAAAGGCTCTCCATCTTCATCTTCTTCGTCTTCCTCTTTCTATTCTTCTTCCACTAGCAGTGCTGTCAGCTGTAGTAACCCTTCACAGGCAACGGCCATGAGAGTTAGTGGCCGGCGTTTCCGTAATGATTCACCGCCGGAGATAAGCCTGAGATCGCCGGTGGTTCGGCCTTATGTTCGGTCGAAAATGCCTCGGCTTCGATGGACGCCTGATCTTCACCGTTCCTTTGTGCTCGCAGTTCAAAGGCTTGGTGGAGAAGACAGGGCTACACCGAAGTTGGTTGTACAGCTGATGAATGTGAAGGGGCTAACAATTTCTCATGTTAAAAGCCACCTTCAGATGTATAGGAGCATGAAGCAGGAGCAGATGAATCAAGCACCAAACAAGAATGATAAGGCACTGGGTTTCTTACAATGTTCCTCCTTCAACTCAAGCTATGGCCAACAGAATGATCATCTTCACCAAGAGAGCTGTGCAACTCATTACATGGCGGAGAATAATGCCGGTATCCAAGCGCAATGGAATCAGAACCGAGAACATTATGACAAAAATGGAAGTCAGGGTGAATCTGTGTGTCACCCAGACGTAATTTATGGCGACAATGGCCGGAAACGTTCCTATATCATCTTCAAGGATCTTCTCAAAAACCACAGTGACCCTGAGAGCATCAATAATAGAGAAAAGGAGGCACTAAGTGCTGCTTGCTATAATAGCTATCATCAAAGATTCCAACTCGAAGATTTAAGTGAGATAGGAGAGAGAGTGGGTGAAGACGACAAACTGTCTCCATCAAGGAGCTCAAAAGGTTTTCAGCCATGGTTGAAGCAAAGCAAGCCTAGTCTACACGTAAATGATGTCTCTCTTGAGCTCACTCTCTCCTCAAAGAGCAATGATATTCATGAGTGA 1035 0.4551 MRTLPTWHPYNVRLLRNTAFKPNKLQRKTIMKKSSQAKSSLSLKGSPSSSSSSSSFYSSSTSSAVSCSNPSQATAMRVSGRRFRNDSPPEISLRSPVVRPYVRSKMPRLRWTPDLHRSFVLAVQRLGGEDRATPKLVVQLMNVKGLTISHVKSHLQMYRSMKQEQMNQAPNKNDKALGFLQCSSFNSSYGQQNDHLHQESCATHYMAENNAGIQAQWNQNREHYDKNGSQGESVCHPDVIYGDNGRKRSYIIFKDLLKNHSDPESINNREKEALSAACYNSYHQRFQLEDLSEIGERVGEDDKLSPSRSSKGFQPWLKQSKPSLHVNDVSLELTLSSKSNDIHE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0625 344 Gene3D - 106 163 - -
Dere06g0625 344 SUPERFAMILY Homeodomain-like 105 162 IPR009057 -
Dere06g0625 344 MobiDBLite consensus disorder prediction 29 93 - -
Dere06g0625 344 Pfam Myb-like DNA-binding domain 109 159 IPR001005 -
Dere06g0625 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 58 224 IPR046955 GO:0003700
Dere06g0625 344 MobiDBLite consensus disorder prediction 297 319 - -
Dere06g0625 344 FunFam Myb family transcription factor 105 163 - -
Dere06g0625 344 NCBIfam myb-like DNA-binding domain, SHAQKYF class 107 161 IPR006447 GO:0003677
Dere06g0625 344 MobiDBLite consensus disorder prediction 29 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0625 Dere-ChrDere06 10419240 10425026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0625 98 164 G2-like Transcription Factor Family AT2G42660 79.104 4.32e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere06g0625 Myb_DNA-binding 4.2e-06 CL0123