Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0615 ATGGTCGTGTTCGTGTTCTCCTTCGTTGAGTGGGCTAAAGCAGGTGCAAAGATCACTATTGGTCGAAGTCGATGGATGGTCAAATTTAAATGGACTGAGCAGCACGGATTCGTGGACCTCCCTTCAACTGTGGAGTTACCTTGGCTGGAAGAGTGTCGCCAATCGTCAATCGTCTTCTCTGGTCAACAAGATAAGATCATCACCATCATTCATCACAAACTCAAAAAACAGAAAAAAAAACACCATCTTTACCACCCAAATACAAAACCCACATACTCCATTTTCTTCTCCTTCTCTTCAATTCCGGAAATCCCCATTCCGACAACCATGTCTTGCTCCAATCTGACAATGTGGGTTTCCTCGAAACCTTCCCTATCCGATGCCTCTTCCCTCTCCTTCCGTTCATCCCTCAACCCACTTTTCCAGCTTCCTTCTCAGAACCCATCTTCTTCGCGATCCTCTGCGACCCAAATCCAGTGTGGTCTGCGTGAGCTCAGAGACCGAATCGATTCCGTGAAAAACACCCAGAAAATCACTGAGGCCATGAAGCTCGTCGCCGCCGCGAAAGTCAGAAGAGCTCAAGAAGCCGTCGTTAATGGCAGACCCTTCTCCGAGACTCTCGTCGAAGTGCTTTACAACATCAACGAGCAGCTCCAAACCGAAGACATCGACGTTCCTCTAACAAAAGTTCGACCAGTGAAAAAGGTCGCTTTGGTTGTATGTACAGGAGATCGAGGTCTCTGTGGGGGTTTCAATAACCAAATCATTAAAAAGGCGGAAGCCAGAATCGCAGAATTGAAGGATCTTGGTCTTAATTATACCGTCATTAGCGTTGGGAAAAAGGGTAATTCGTATTTCATTCGTAGGCCTTACATACCAGTCGACAGATTTCTCGAGCAAGGTACACTTCCTACTGCAAAAGAAGCTCAAGCCATTGCTGATGATGTTTTCTCACTATTTGTGAGCGAAGAGGTTGATAAGGTTGAGTTATTGTACACAAAGTTCGTATCTTTAGTGAAATCCGATCCTGTGATTCATACTCTGCTTCCTCTGTCACCCAAAGGAGAGATCTGTGATGTGAATGGGAATTGTGTGGATGCTGCTGAAGATGAGTTCTTTAGGTTGACTACAAAGGAAGGGAAGTTAACTGTGGAGAGAGACACAGTGAGGACCAAGACATCAGATTTCTCTCCCATATTGCAGTTTGAGCAGGACCCAGTTCAGATTCTTGATGCCCTATTGCCTCTGTATTTGAATTCTCAGATTCTTAGAGCACTGCAGGAGTCACTAGCCAGTGAGCTAGCTGCTAGAATGAGTGCTATGAGCAATGCTACCGATAACGCAGTGGAATTGAAGAGGAACTTGTCAAGGGTATACAATAGGGAACGTCAAGCTAAGATCACTGGTGAAATTCTGGAAATTGTTGCTGGTGCCAACGCCCTAGCATAG 1449 0.4562 MVVFVFSFVEWAKAGAKITIGRSRWMVKFKWTEQHGFVDLPSTVELPWLEECRQSSIVFSGQQDKIITIIHHKLKKQKKKHHLYHPNTKPTYSIFFSFSSIPEIPIPTTMSCSNLTMWVSSKPSLSDASSLSFRSSLNPLFQLPSQNPSSSRSSATQIQCGLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTEDIDVPLTKVRPVKKVALVVCTGDRGLCGGFNNQIIKKAEARIAELKDLGLNYTVISVGKKGNSYFIRRPYIPVDRFLEQGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDVNGNCVDAAEDEFFRLTTKEGKLTVERDTVRTKTSDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNAVELKRNLSRVYNRERQAKITGEILEIVAGANALA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0615 482 Gene3D ATP synthase, gamma subunit, helix hairpin domain 378 481 - -
Dere06g0615 482 Hamap ATP synthase gamma chain [atpG]. 159 481 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dere06g0615 482 ProSitePatterns ATP synthase gamma subunit signature. 467 480 IPR023632 -
Dere06g0615 482 FunFam ATP synthase gamma chain, chloroplastic 378 481 - -
Dere06g0615 482 Coils Coil 441 461 - -
Dere06g0615 482 Pfam ATP synthase 162 481 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dere06g0615 482 FunFam ATP synthase gamma chain, chloroplastic 160 227 - -
Dere06g0615 482 NCBIfam ATP synthase F1 subunit gamma 161 481 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dere06g0615 482 CDD F1-ATPase_gamma 162 478 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dere06g0615 482 PANTHER ATP SYNTHASE GAMMA CHAIN 108 481 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dere06g0615 482 PRINTS ATP synthase gamma subunit signature 233 252 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dere06g0615 482 PRINTS ATP synthase gamma subunit signature 326 343 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dere06g0615 482 PRINTS ATP synthase gamma subunit signature 428 447 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dere06g0615 482 PRINTS ATP synthase gamma subunit signature 459 480 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dere06g0615 482 Gene3D - 229 352 - -
Dere06g0615 482 Gene3D ATP synthase, gamma subunit, helix hairpin domain 161 228 - -
Dere06g0615 482 FunFam ATP synthase gamma chain, chloroplastic 229 352 - -
Dere06g0615 482 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 161 481 IPR035968 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0615 Dere-ChrDere06 10278906 10281511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0615 133 481 Primary Pumps ATPases AT1G15700 71.067 2.88e-178 503