Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0594 ATGGGTTGCTTCTCATGCTGCCCTTCCGAGTCTGAAGAAGCCATCGAAACGGAATGTGAAACAGAAGTTTCGAAACGTAGGGCAGCATTGAAATCCGATACGTTGAAATCAATCATTGCAACTATATCACTCAAAACAGGAAGCAGCAGGCACAGACGGATAACCGCAGAGATACAAAAACATGGAATTGCACAAAATGAAGCTAAAGTTTTCACATACAAAGAACTCGCTGATGCAACTAACGACTTCAGCGATGAATCCAGAATAGGCGAGGGTGGATTCGGGATTGTCTACAAAGGACGCCTAGAGGGCATCGATCAAGTTGTGGCTGTGAAGCAACTAGACAGACAAGGAAGGCAAGGAACTCGAGAATTTCTGTCAGAGGTTTTGATGCTAAGCTTGTTTAAGCATCCAAACCTTGTCAATCTGATTGGTTATTGTGTTGAAGACGACCACAGGATTTTAGCCTACGAATTCATGCCCAACGGGTGTCTAGAAAGTCACCTTCTAGACTTGGCTCCAGATAAGGATCCTTTGTCTTGGTATAGGAGGATGAAGATAGCTGAGGGAGCTGCAAGAGGGCTCGAGTATCTGCATGAAATAGCTGAGCGAACAGTAATATACCGTGATTTTAAAGCATCAAATATATTATTAGATGAAGATTTCAACCCAAAGCTTTCTGATTTTGGAATGGCCAAGATGGGTCCAGCACCAGGGCAGCTTCATATCTCCACAAGGGTCATGGGAACCTATGGCTACTGTGCACCAGAGTATGCTTCTACAGGTCAGCTAACTACTAAGTCTGATATTTACAGCTTTGGTGTTGTGCTTTTGGAGATAATCTCTGGCAGAAGAGTCATTGATGTTACGAGAGCAGCAGATGAACAAAACCTGATTACATGGGCAACGCCTCTGTTTAAGGACAAAAGCAAGTTTACTCTGATGGCTGACCCTTTGCTCAAGGGTAACTACCCTGAGAAGAGTCTATATCAAGCTCTTGCAGTGGCAGCAATGTGTCTGCAAGAGGAAGCCGAGACAAGACCTTTAATGGGCGACGTTGTGGAAGCTCTTGAGCTTCTATCAAAGCCAAAAGACGGAGAAACAGAGATCGCAGCTGAACCTACAGTTAGAACTGCTAGCCATGTTGGATCATTTAGAATTGAAAGTGCTGTACACGACCGACAGATGTAG 1191 0.4442 MGCFSCCPSESEEAIETECETEVSKRRAALKSDTLKSIIATISLKTGSSRHRRITAEIQKHGIAQNEAKVFTYKELADATNDFSDESRIGEGGFGIVYKGRLEGIDQVVAVKQLDRQGRQGTREFLSEVLMLSLFKHPNLVNLIGYCVEDDHRILAYEFMPNGCLESHLLDLAPDKDPLSWYRRMKIAEGAARGLEYLHEIAERTVIYRDFKASNILLDEDFNPKLSDFGMAKMGPAPGQLHISTRVMGTYGYCAPEYASTGQLTTKSDIYSFGVVLLEIISGRRVIDVTRAADEQNLITWATPLFKDKSKFTLMADPLLKGNYPEKSLYQALAVAAMCLQEEAETRPLMGDVVEALELLSKPKDGETEIAAEPTVRTASHVGSFRIESAVHDRQM 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0594 396 PANTHER OS07G0668900 PROTEIN 3 366 - -
Dere06g0594 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Dere06g0594 396 Pfam Protein kinase domain 84 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0594 396 Gene3D Transferase(Phosphotransferase) domain 1 160 379 - -
Dere06g0594 396 FunFam Serine/threonine-protein kinase PBS1 160 374 - -
Dere06g0594 396 Gene3D Phosphorylase Kinase; domain 1 43 159 - -
Dere06g0594 396 FunFam Serine/threonine-protein kinase CDL1-like 54 159 - -
Dere06g0594 396 CDD STKc_IRAK 89 360 - -
Dere06g0594 396 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Dere06g0594 396 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0594 396 SUPERFAMILY Protein kinase-like (PK-like) 65 360 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0594 Dere-ChrDere06 9981251 9983584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0594 1 395 Glycoside Hydrolase AT3G07070 51.449 7.38e-145 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dere06g0594 Pkinase 8.3e-45 CL0016