Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0569 ATGGTTCGTTCTCCAAAACTGTTCCTTCTTCTCTGCACTATTGCTCTACTTTCTGACGTTTCCTTCGCCGACCCACCTTATGAAAATTGTTCAACAAGCAGTAACTACACCAAAGGAAGCTCCTTTCAGAACAACCTTAACGACCTCCTCGTTTCCCTACCCTTCAATGCTTTAATATCCAAATCTTACAATGTCTCTTATGGAAACGACACAGACAGAGTCTATACCCTCTTCATATGCTACGACTATGTTTCAAATCAAACATGCCAAGATTGCATAACCACGGCAACACAAGACATTCTTAAACTCTGTCCTCAAGCAGAAGAAGCCATTATTTGGGAAGAGGTATGCCAGCTACGTTATTCCAACACGAATTTCTACGGAAAAGTGGATATCACAGGAAAATTAGGGTTGACTAATATGCAGAATGTCTCAGACCCTGAGAAGTTTGAGTCTGTGGTGAATGGGTTATTGTATAATCTTACTGAGAAGGCATCGTTTAATGTTTCTGCTGATTTGTATGCTATTGGAGAAGCACCCTATCAAGAGAATACAATATATGGGTTAGTTCAGTGCACAAGAGACTTATCATCTATTGATTGCAATATATGTCTGAAAAGTGCGACAAGTTACTTACCCACTTGTTGCTATCCCAAAATCGGAGCTAGAGTTTTAAGTCGTAGCTGCTACTTGAGATTTGAATTTTACCCATTTTATGATGATGAACCTGATCCCAATGATTCTTCAACAGAGAAAGGCAAAAGTAAAGCAAGCAAAATATGGAAGATTACAGGAAGTATAGCAGTGGCAGGCTTAGCAATAGCTATTTTCAGTTGCTGCATCTACTTTCTGAAGAAGAGAACTAAGAGAAGTAAAAATGGAATAGATAGTCATGTAATCGATCTTTATAGCTCCGGGCAGCAAGGTGATAGAGCGTTCCAGAATTTTCGTGGAAGAAATGATAAGATATCTGAGGACTTGCCTTATTTTGATCTTGAAACTCTCTGTGTTGCTACCAAAAACTTTTCTGATTCAAATCAGCTTGGCCAAGGTGGCTTTGGCCCTGTTTACAAGGGCATACTAAGTGATGGTCAGGAAGTAGCAATCAAGAGGCTTTCAACTGGCTCTGAACAGGGCTCTAAAGAATTCATAAACGAGGTTCTGCTGATAATGAAACTCCAACACAAAAATCTTGTGAGGCTTCTTGGATTTTGTTTAGATGGGGAAGAAATGCTTCTTGTTTATGAATTTTTGCCTAATGGCAGCCTTGATGTTGTCCTTCTTGATCCAAGGCAACGAGCACAAGTAAATTGGATCAAACGTATTGATATAATAAGTGGAATAGCGAGGGGGATTCTTTATCTTCATGAGGATTCTCGGCTAAAAGTAATTCATAGAGACCTAAAAACAAGTAATATATTATTGGATAGTGACATGAATCCAAAGATCTCAGACTTTGGAATGGCAAGGGTATTTGCTGGAACCGAAGGTGAAGCTAACACTGCTACAATAGTTGGCACATGTGGGTACATGGCTCCAGAGTATGCTATGGAAGGAATCTACTCCGTAAAATCAGATGTTTTTGGGTTTGGAGTACTACTGCTTGAGATTATCACAGGGAGACGCAACACAGGTTCCTTTCACTCTAAACGTGCTCCTAGCCTTCTGGCATACGCATGGCACCTGTGGAATGAGGGAAAGGCACTGGAATTAATGGACCCTTTATTAGCTGATTCATGCCCTCAAGATCAGTTTCTGAAATTCTTGAATGTTGGATTACTATGTGTTCAAGAAGATGCATATGACAGGCCAACCATGTCTTCTGTTGTTTTAATGTTGAAAAGTAAATCACCAACTCTTGGCCAGCCAGAAAGGCCACCCTTTTGTGTTGGTAGAATCACTGATATTGACCATAGTGAGCTAGAAAACAAACAATGTTCAACTTTTAATGGACCTTCATGA 1962 0.3991 MVRSPKLFLLLCTIALLSDVSFADPPYENCSTSSNYTKGSSFQNNLNDLLVSLPFNALISKSYNVSYGNDTDRVYTLFICYDYVSNQTCQDCITTATQDILKLCPQAEEAIIWEEVCQLRYSNTNFYGKVDITGKLGLTNMQNVSDPEKFESVVNGLLYNLTEKASFNVSADLYAIGEAPYQENTIYGLVQCTRDLSSIDCNICLKSATSYLPTCCYPKIGARVLSRSCYLRFEFYPFYDDEPDPNDSSTEKGKSKASKIWKITGSIAVAGLAIAIFSCCIYFLKKRTKRSKNGIDSHVIDLYSSGQQGDRAFQNFRGRNDKISEDLPYFDLETLCVATKNFSDSNQLGQGGFGPVYKGILSDGQEVAIKRLSTGSEQGSKEFINEVLLIMKLQHKNLVRLLGFCLDGEEMLLVYEFLPNGSLDVVLLDPRQRAQVNWIKRIDIISGIARGILYLHEDSRLKVIHRDLKTSNILLDSDMNPKISDFGMARVFAGTEGEANTATIVGTCGYMAPEYAMEGIYSVKSDVFGFGVLLLEIITGRRNTGSFHSKRAPSLLAYAWHLWNEGKALELMDPLLADSCPQDQFLKFLNVGLLCVQEDAYDRPTMSSVVLMLKSKSPTLGQPERPPFCVGRITDIDHSELENKQCSTFNGPS 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0569 653 Pfam Salt stress response/antifungal 142 235 IPR002902 -
Dere06g0569 653 Pfam Salt stress response/antifungal 30 123 IPR002902 -
Dere06g0569 653 ProSiteProfiles Gnk2-homologous domain profile. 132 238 IPR002902 -
Dere06g0569 653 FunFam Liguleless narrow1 418 621 - -
Dere06g0569 653 Gene3D - 25 126 IPR038408 -
Dere06g0569 653 Gene3D - 135 238 IPR038408 -
Dere06g0569 653 CDD STKc_IRAK 348 614 - -
Dere06g0569 653 SUPERFAMILY Protein kinase-like (PK-like) 324 639 IPR011009 -
Dere06g0569 653 SMART serkin_6 342 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0569 653 ProSiteProfiles Gnk2-homologous domain profile. 24 126 IPR002902 -
Dere06g0569 653 ProSiteProfiles Protein kinase domain profile. 342 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0569 653 Gene3D Transferase(Phosphotransferase) domain 1 418 621 - -
Dere06g0569 653 Pfam Protein tyrosine and serine/threonine kinase 346 611 IPR001245 GO:0004672|GO:0006468
Dere06g0569 653 FunFam Cysteine-rich receptor-like protein kinase 10 312 417 - -
Dere06g0569 653 FunFam Cysteine-rich receptor-like protein kinase 10 135 238 - -
Dere06g0569 653 FunFam Cysteine-rich receptor-like protein kinase 28 26 125 - -
Dere06g0569 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Dere06g0569 653 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 639 - -
Dere06g0569 653 Gene3D Phosphorylase Kinase; domain 1 304 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0569 Dere-ChrDere06 9561408 9563959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0569 7 635 Receptor kinase-like Gene Family AT4G05200 41.553 1.37e-169 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere06g0569 PK_Tyr_Ser-Thr 8.2e-48 CL0016