Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0568 ATGCTTTTCCTCATCATTCCTATTTTATTTTTTCACCATGTTTCTGGTTCAGACCCTCTCTTCATTTGGTGTCCAAGTGATTTTCCAGATTACACACTCAACTCTCCATTTCATAGCAACCTCAAGCTTCTTCTAGGAGCACTTTCCTCCAACATTTCAGTCTCAGGTTTCTACAACACGTCCATTGGAGAACAAGAAGACAAAGTCTATGGACAAGCACTATGCAGAGGAGACGTAAACTTAAATTCTACAGTTTGTAAGAACTGCGTTGAAAAAGCAAGCCAAGATATACTCAACAAATGCAGAAGCCAAGATGCTATGATTTGGTATGACCTTTGTCAAGTAAGGTACTCTTTTCAGATGTTCATTTCAAGGATGGTTTATACCGGGAAGTTTCCAGAGGAAAATAATCAGGCAAAGAATGTGTCGGATCCTGTTAGATTCAACCAGGTTTTAATGTATTTAATGCAGAACTTGTCCTTTGAGGCTGCGTTTGTTCCGTACAAGACCATGTTTGCATCTGGCGAAATTGAATTTTCCCAGAAAGTTACAATTTATGGTCTACTACAATGCACAAGGGACATCTCTGAAACATTATGCTATAACTGTTTGAGTTCTGCTCTAGGAGAGCTTGGATCTTGTTGTTCATATCGTGAGAGCGGGATAGTTCTTAGTCGATCTTGTAATGTGAGGTTTGAGCTGTCTCAGTTCTTTACTACTTCTTCACAGTACCTTTTGGTTTACCCAGCTTCCAAAGGAGGAAAATGGAAGACATGGATGCTTGTGTTGATTATATGTGCATCAGTGTTAATATTGGCAGTTCCTCTTTGGTTGGGCACTGCTTATTTCCATAGAAAACAAAGCGAAGACGGAGATGAAGAAAAAAGCGGAAAGATGCTGCTGCAACAGTTGGCTAGCCCCAAGAGTGTAACAATTACACAAGATGGTGAATTAATTAGCTCGGAGGAACTTGAGTTCATAAGTTTAGCAACAATTAAGGTAGCTACTGGTGACTTTTCTGATACAAACAAGATAGGACAGGGAGGTTTTGGTGCTGTGTACAAGGGTGTTCTACCAGATGGGAATGAAGTAGCAGTTAAAAGGCTATCAAGAAAGTCTTGGCAAGGCATAGAGGAATTCAAAAATGAGGTCATTCTGATTGCAAAACTTCAACACAAGAATTTGGTGAAACTGTTGGGATGTGGTTTGGAAGGAGATGAAAAGTTTCTCATATATGAATTCATGTCCAACAAAAGTCTTGATAACTTTATCTTTGATTCAGAAAAGCGTTCACAACTTGATTGGAAAACATGGTATGGCATTATCATTGGGATAGCTAGAGGACTGCTTTATCTTCATGAGGAGTCTAGGCTTAGAATCATTCACAGGGACTTAAAACCAAACAATGTGTTGCTTGATCATGACATGGTTGCAAAGATATCAGATTTTGGTATGGCTAGAATTTTTTATGAGAATCAGAATGCTGCTAATACCAAAAGAGTTGTGGGAACTTATGGTTATATGGCTCCAGAATATGCAATGGAAGGATTGTTCTCTGTAAAATCTGATATCTTCAGCTTCGGTGTCATGTTGCTTGAGATCGTCAACGGGAAGAGAAATAGTGGCTTTTATATCACTGAACTTGCGCCAACCCTGTTAACATATGCATGGAGGTTATGGAATGAAGGGAAAGATATGGACTTTGTGGATCCTCACTTACTGGAAACAAGTCTTGCCTCTGAAGTTTTAAGGTGCATGCATATAGGGCTGTTATGTGTACAGGAAGATCCAGAAGACAGACCCACCATGTCAGATGTTATGGTTCTGCTTGGAAGTGAATCAGTGTCTCTTCCTCAACCCAAACAACCTGCATTCTCTCTGGGTAGAGCAGTTCCAGTTGGTCCATCTTTGATGACAAATTCCTCAGTGAATCACATTATATTGTCCAGCATTCAACCTCGATGA 1965 0.398 MLFLIIPILFFHHVSGSDPLFIWCPSDFPDYTLNSPFHSNLKLLLGALSSNISVSGFYNTSIGEQEDKVYGQALCRGDVNLNSTVCKNCVEKASQDILNKCRSQDAMIWYDLCQVRYSFQMFISRMVYTGKFPEENNQAKNVSDPVRFNQVLMYLMQNLSFEAAFVPYKTMFASGEIEFSQKVTIYGLLQCTRDISETLCYNCLSSALGELGSCCSYRESGIVLSRSCNVRFELSQFFTTSSQYLLVYPASKGGKWKTWMLVLIICASVLILAVPLWLGTAYFHRKQSEDGDEEKSGKMLLQQLASPKSVTITQDGELISSEELEFISLATIKVATGDFSDTNKIGQGGFGAVYKGVLPDGNEVAVKRLSRKSWQGIEEFKNEVILIAKLQHKNLVKLLGCGLEGDEKFLIYEFMSNKSLDNFIFDSEKRSQLDWKTWYGIIIGIARGLLYLHEESRLRIIHRDLKPNNVLLDHDMVAKISDFGMARIFYENQNAANTKRVVGTYGYMAPEYAMEGLFSVKSDIFSFGVMLLEIVNGKRNSGFYITELAPTLLTYAWRLWNEGKDMDFVDPHLLETSLASEVLRCMHIGLLCVQEDPEDRPTMSDVMVLLGSESVSLPQPKQPAFSLGRAVPVGPSLMTNSSVNHIILSSIQPR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0568 654 ProSiteProfiles Gnk2-homologous domain profile. 130 237 IPR002902 -
Dere06g0568 654 Gene3D - 23 122 IPR038408 -
Dere06g0568 654 Gene3D - 131 237 IPR038408 -
Dere06g0568 654 FunFam Cysteine-rich receptor-like protein kinase 10 134 237 - -
Dere06g0568 654 Gene3D Phosphorylase Kinase; domain 1 302 414 - -
Dere06g0568 654 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 305 414 - -
Dere06g0568 654 ProSiteProfiles Gnk2-homologous domain profile. 19 122 IPR002902 -
Dere06g0568 654 ProSiteProfiles Protein kinase domain profile. 339 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0568 654 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 631 - -
Dere06g0568 654 Pfam Salt stress response/antifungal 140 233 IPR002902 -
Dere06g0568 654 Pfam Salt stress response/antifungal 29 119 IPR002902 -
Dere06g0568 654 SUPERFAMILY Protein kinase-like (PK-like) 322 609 IPR011009 -
Dere06g0568 654 Pfam Protein tyrosine and serine/threonine kinase 342 608 IPR001245 GO:0004672|GO:0006468
Dere06g0568 654 FunFam Uncharacterized protein 415 616 - -
Dere06g0568 654 SMART serkin_6 339 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0568 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Dere06g0568 654 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Dere06g0568 654 Gene3D Transferase(Phosphotransferase) domain 1 415 617 - -
Dere06g0568 654 CDD STKc_IRAK 345 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0568 Dere-ChrDere06 9555480 9558424 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0568 24 627 Receptor kinase-like Gene Family AT4G23230 44.141 3.37e-172 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere06g0568 PK_Tyr_Ser-Thr 1.1e-47 CL0016