Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0567 ATGATTGTTATCTTCTTCATCTTCATCATCGTCATCCTTGGCGCCACCGAATCAGCCGCCTCTGTATTCAACGACGTCAACTGCGCGACCAACGTTACTTTCACTCGTAATGGCACCTTCCAAACCAACCTCAAAACCCTCCTCTCCTTCCTCTCCACCAACGCCACCGGCGGCCCCAGATTCTACAACGCCACCGTTGGCAGCGGCGGAGGAGGAGGAAATGCTTCGGACACCGTCTACGGCCTTTTCATGTGCCGCGGCGATGTGCCGTACCCACTGTGCAGCGAGTGCGTGAACTTCGCGACCCAAAGGATAAGCTCATCGTGTCCCTCAGCGAAAGAAGCCGTTATCTGGTACAACGAGTGCTTGCTGCGATATTCCTACAGGTTTATCTTCTCTTCCATGGAGGAATGGCCTTGGTATCAGGTCAAGATTCCGTTAGGCGATCCTGGGCTTTTAGGCAGTCGTCGTTTTTACCAAACGTTGGGATCTATATTGAATGGTCTGATCGATGGAGCAGCCCAGGCTCTTACGAGATCTGATTCCAAGTTCGGTATTAAGCAAGGCTACGCATCGGACAACACGACGCTGTACGGCTTGGCTCAATGCACGCCGGACTTGGCCGCTGGCGACTGCAAGCGGTGTGTGCGGGATGCGATAGCTGAGATTACGACGTCGTGTTGCGGAGGTAGCATTGGTCAGAGTGTTATGTTCCCCAGTTGCATTGTTCGCTACGAAACGTATCCGTTTTATCAGCATTCCGGAACTTCGACACCGACGGCGGCTAACGGAAAAAGCAGCAAAGTACGAACGCAAATTATTGCGATTCTTGCGTCGATTATTGTTATGGTAGTGGTACTCTGTCTTTTTTACTGTATCCTACGGACAAAAGCTACGAAGAGAACACAGAAGGCCATTCTCGAAGAAAACTTTGGGGTTGAAATTATCACCTTGGATTCCTTGCAAGTTGATATGGCCACAATTCATGAGGCCACAAACTACTTTTCTGATGAAAACAGGATAGGCAAGGGTGGATTTGGAGAAGTTTACAAGGGAATTCTTTCGAATGGACAAGAAATAGCTGTGAAGAGATTATCGAGAAACTCTATGCAAGGAGAGGAACAATTCAAAAATGAGGTTTTACTTATAGCAAAACTTCAACATAGAAATTTAGTGAAACTACTAGGGTTTTGCGTGAACAAAGAAGAGAAGATACTTATCTACGAATATGTTCCTAACAAGAGCCTTAATCACTTTTTATTTGATCCTATGAAGCAAAGAGAATTAACTTGGTCAGAGCGTTTTATGATTATAAAAGGAATTGCTCGAGGAACTCTTTATTTACATGAAGACTCTCGCTTGAAGATCATACATCGTGATCTTAAACCAGGCAATATTTTATTAGATGGTAGCATGAATCCAAAAATCTCAGATTTTGGTATGGCAAGAATGGTCACATTAGATGAAATTCAAGGAAGTACAAATAGAATTGTTGGGACATATGGTTATATGTCTCCAGAATATGCAATGCATGGATATTTTTCTGTGAAATCTGATGTTTTTAGCTTTGGAGTCATGGTGCTCGAGATTATTAGTGGAAGAAGGAATTCTTGTTCATATGAATCATGCCGTGTTGATGACCTATTGAGCTATGCTTGGAGACAATGGAGGGAAGGATCAATATATGAATTGCTGGATCCAGCAGTGAAAGAATCCTATTCCCAAGAAGAAGTCTTTCGGTGCATCCAGATCGGTTTATTGTGCGTTCAAGAAAACCCAGATGATAGGCCTACAATGGGAACTGTTGCTTCATATCTTAGCAACGTCTCAGTTGAATTACCACATCCTCTGGAACCTGCATTTTTTATGCAAGGAAGAAGAAGACGATACAATGCTGAACATGAATCAAGTTCCGGACACTTCACCAACTATTCTGTCTCTTCCTCCATAAATGAGATGTCTAAAAGTAAATTTTTCCCTCGATAG 1986 0.4386 MIVIFFIFIIVILGATESAASVFNDVNCATNVTFTRNGTFQTNLKTLLSFLSTNATGGPRFYNATVGSGGGGGNASDTVYGLFMCRGDVPYPLCSECVNFATQRISSSCPSAKEAVIWYNECLLRYSYRFIFSSMEEWPWYQVKIPLGDPGLLGSRRFYQTLGSILNGLIDGAAQALTRSDSKFGIKQGYASDNTTLYGLAQCTPDLAAGDCKRCVRDAIAEITTSCCGGSIGQSVMFPSCIVRYETYPFYQHSGTSTPTAANGKSSKVRTQIIAILASIIVMVVVLCLFYCILRTKATKRTQKAILEENFGVEIITLDSLQVDMATIHEATNYFSDENRIGKGGFGEVYKGILSNGQEIAVKRLSRNSMQGEEQFKNEVLLIAKLQHRNLVKLLGFCVNKEEKILIYEYVPNKSLNHFLFDPMKQRELTWSERFMIIKGIARGTLYLHEDSRLKIIHRDLKPGNILLDGSMNPKISDFGMARMVTLDEIQGSTNRIVGTYGYMSPEYAMHGYFSVKSDVFSFGVMVLEIISGRRNSCSYESCRVDDLLSYAWRQWREGSIYELLDPAVKESYSQEEVFRCIQIGLLCVQENPDDRPTMGTVASYLSNVSVELPHPLEPAFFMQGRRRRYNAEHESSSGHFTNYSVSSSINEMSKSKFFPR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0567 661 Gene3D Phosphorylase Kinase; domain 1 295 410 - -
Dere06g0567 661 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 21 130 - -
Dere06g0567 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Dere06g0567 661 Gene3D - 154 250 IPR038408 -
Dere06g0567 661 Gene3D - 21 130 IPR038408 -
Dere06g0567 661 FunFam cysteine-rich receptor-like protein kinase 10 411 613 - -
Dere06g0567 661 Gene3D Transferase(Phosphotransferase) domain 1 411 614 - -
Dere06g0567 661 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 295 410 - -
Dere06g0567 661 SMART serkin_6 335 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0567 661 ProSiteProfiles Protein kinase domain profile. 335 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0567 661 CDD STKc_IRAK 341 606 - -
Dere06g0567 661 Pfam Protein tyrosine and serine/threonine kinase 338 604 IPR001245 GO:0004672|GO:0006468
Dere06g0567 661 SUPERFAMILY Protein kinase-like (PK-like) 323 635 IPR011009 -
Dere06g0567 661 Pfam Salt stress response/antifungal 28 127 IPR002902 -
Dere06g0567 661 Pfam Salt stress response/antifungal 157 248 IPR002902 -
Dere06g0567 661 ProSiteProfiles Gnk2-homologous domain profile. 140 250 IPR002902 -
Dere06g0567 661 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Dere06g0567 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 656 - -
Dere06g0567 661 ProSiteProfiles Gnk2-homologous domain profile. 22 131 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0567 Dere-ChrDere06 9544751 9548516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0567 2 661 Receptor kinase-like Gene Family AT4G05200 43.338 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere06g0567 PK_Tyr_Ser-Thr 2.3e-47 CL0016