Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0566 ATGAATATGTCTTGTCCTGAGGGAAGCCCAGAAGTACGGATTATCCTCACGGGATGTAACATTAGATATGACACGAAGTTATTTTATAATGTAAGCAAGGCATCGCCTGCACCCGCACCTGCACACGTTCCTCTTGCACCGTCACTCGTTCTTGCTGCACCTTTTTCAGGTAAAAGAGATACTGGATCACGAACTCATGTCATCATTGTTGTCACCATTATCGTTTCAGTCACGATTTTTTGTTCGGGCTGGTATTTGCTTCGAAGAAAAGCAAGGGACCAGGCTATTCTTAGAGAAAACTTCGGGGATGAAAGCTCCAACCTGAAGTCTTTGAGATTCAATTTGGCAACAATTGAAGCTGCAACAAATAAGTTTTCTCATGAGAATAGAATAGGAAAAGGTGGATTTGGAGAAGTTTATAAGGGCATCCTTCCCGATGGACGTGAAATTGCTGTCAAGAGACTCTCAAAAAGATCTGGACAAGGAGCTTTAGAATTCAATAATGAAATTTTATTGATAGCCAAACTTCAACATAGAAATTTAGTGGCCTTATTAGGATTTTGCCTCGAAGAACAAGAAAAAATTCTTATTTACGAATTTGTGCCTAACAAGAGCATTGATTGCTTTTTATTTGATTCTAAAAAACAAAGACTACTAAATTGGTCAGTCCGTTTCAATATCATTGGAGGGATTGCTCGGGGGCTTCTTTATCTACATGAGTATTCTCGCCTCAAAGTTATACATCGTGATCTCAAACCTAGCAATGTTTTATTAGATGCAAAAATGAATCCAAAAATATCTGATTTTGGTATGGCAAGAATGGTTGCTATAGATCAAGACCAAGGAAGTACAAATAGGATTGTTGGAACATATGGTTATATGTCTCCGGAATACTTAATGCATGGACAGTTTTCAGACAAATCAGATGTATTTAGTTTTGGAGTTATAATCTTAGAAGCAATTAGCGGCAGAAGGAATGCAAGATCTTATGAGTCACATCTCTTAACTGACGCTTGGAAACAATGGAATGAAGGAACACCATTACAACTATTGGACCCATTTCTAATGGAATCGTGTTCTCAAAATGAAGTAATAAAATGTGTGCAGATTGGATTATTATGTGTTCAAGGAAATCCAGATGATAGGCCAACAATGGCTCAAATTGTTTCATATCTTGGCAATATTTCCATTGAATTACCATTTCCAAGAGAACCCGCATTCTTCATTCATAGTAGAGACAATCCTAGTCCAACTATGGCAGCTTCATCTTGTTCGGATCAATCTTCTCAGAGTTCCAAGCCTTCCTCTTTGAATGAAATATCCCAGAGTGAGTTCTTGCCTCGATGA 1347 0.3808 MNMSCPEGSPEVRIILTGCNIRYDTKLFYNVSKASPAPAPAHVPLAPSLVLAAPFSGKRDTGSRTHVIIVVTIIVSVTIFCSGWYLLRRKARDQAILRENFGDESSNLKSLRFNLATIEAATNKFSHENRIGKGGFGEVYKGILPDGREIAVKRLSKRSGQGALEFNNEILLIAKLQHRNLVALLGFCLEEQEKILIYEFVPNKSIDCFLFDSKKQRLLNWSVRFNIIGGIARGLLYLHEYSRLKVIHRDLKPSNVLLDAKMNPKISDFGMARMVAIDQDQGSTNRIVGTYGYMSPEYLMHGQFSDKSDVFSFGVIILEAISGRRNARSYESHLLTDAWKQWNEGTPLQLLDPFLMESCSQNEVIKCVQIGLLCVQGNPDDRPTMAQIVSYLGNISIELPFPREPAFFIHSRDNPSPTMAASSCSDQSSQSSKPSSLNEISQSEFLPR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0566 448 FunFam cysteine-rich receptor-like protein kinase 10 201 399 - -
Dere06g0566 448 MobiDBLite consensus disorder prediction 412 448 - -
Dere06g0566 448 Gene3D Phosphorylase Kinase; domain 1 89 200 - -
Dere06g0566 448 SMART serkin_6 125 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0566 448 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 46 443 - -
Dere06g0566 448 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 87 200 - -
Dere06g0566 448 CDD STKc_IRAK 131 395 - -
Dere06g0566 448 SUPERFAMILY Protein kinase-like (PK-like) 109 428 IPR011009 -
Dere06g0566 448 ProSitePatterns Protein kinases ATP-binding region signature. 131 153 IPR017441 GO:0005524
Dere06g0566 448 ProSiteProfiles Protein kinase domain profile. 125 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0566 448 Pfam Protein kinase domain 126 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0566 448 Gene3D Transferase(Phosphotransferase) domain 1 201 399 - -
Dere06g0566 448 MobiDBLite consensus disorder prediction 415 448 - -
Dere06g0566 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0566 Dere-ChrDere06 9509440 9512646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0566 87 448 Receptor kinase-like Gene Family AT4G11480 54.223 7.00e-143 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere06g0566 Pkinase 6.1e-47 CL0016