Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0556 ATGGCTCTCTCAGAACCATCAAACCGCCAATCTCTGATCCCAAGCTTCCTCTACTCCTTTTCTTTCTCCGCCAAAACTTTACCTCCCCAGAAGATGCTCAACTCTAGCCCCGTCACTGTCTCTTCTCCAGCTTTGAATCTCGATGGAGGATTGTCCAGGCCCAACTTCATGATTCCGGCTCCAAGTGAGCCTGGCAAGATCGAGATGTACTCGCCTGCCATCTATGCTGCTCGTACTTTTGGTGGAATTCTCAGCTGTGGACTCACCCACATGGCAGTTACACCTCTTGACCTTGTCAAGTGTAATATGCAGATTGACCCTGCGAAGTATAAGAGCATCTCGTCTGGATTCGGAGTGTTGCTTAAGGAGCTGGGAGTCAAGGGTTTCTTCAGAGGCTGGGTGCCTACCTTGCTTGAGCATGCGGTGAAGTACAAGACCTTGGTCTACCTTACTGGTTCAGCATCTGTTGAGGTTATTGCTGATGTTGCACTTTGCCCCTTTGAGGCCGTAAAGGTCCAAGTTCAAACTCAGCCAGGTTTTGCTAGAGGTCTATCTGATGGGCTCCCAAAATTCGTGAAATCTGAAGGAACTTTGGGGCTGTACACGGGAATAGTCCCTCAGTTGGGACACCGGCTTTGGTTGATCAAACTATCCTTGAAAGCGGTTGGTCTCTCTAATGCATCCAATAATGAGGCATTAAACGATGAGGTGAAGTCATTGTCAAAGTCCCTTGTAGGTGGCAGTATGAATGTCAACAAAATAAGAGTCTTAACTTTCTGGTTTCCTGAGCGTGTAGTTCAAGGAAATGTTGTGTCGTTAATTCCCAAGTTGCGAAGATATATGAAGGAAGACGATCACATCCGACCAAAACCAAATCGGGTGAACCATCCTTCAGGCAATCAACCTAATGTAGTTGCTGTAACTCATAATAATCCGGTGGTTGAAATGCAGCAATATGGAGAACCAATTCCTAGTCAGTCGCCCAATGATATTGCAAAACCATCTACTAGTGGCAATGTGTCTCTAAACTCATCTCATAACCTTTTAGCAAATGCAAGGATGTTGCCACCTGGAAACCCTCAGGCCTTGCAGATGTCCCAAGGACTTCTTTATGGTGTTTCAATGGCTCCAAGGCCACAGCAACTGGACCCATAA 1155 0.4658 MALSEPSNRQSLIPSFLYSFSFSAKTLPPQKMLNSSPVTVSSPALNLDGGLSRPNFMIPAPSEPGKIEMYSPAIYAARTFGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKELGVKGFFRGWVPTLLEHAVKYKTLVYLTGSASVEVIADVALCPFEAVKVQVQTQPGFARGLSDGLPKFVKSEGTLGLYTGIVPQLGHRLWLIKLSLKAVGLSNASNNEALNDEVKSLSKSLVGGSMNVNKIRVLTFWFPERVVQGNVVSLIPKLRRYMKEDDHIRPKPNRVNHPSGNQPNVVAVTHNNPVVEMQQYGEPIPSQSPNDIAKPSTSGNVSLNSSHNLLANARMLPPGNPQALQMSQGLLYGVSMAPRPQQLDP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0556 384 Pfam Mitochondrial carrier protein 148 208 IPR018108 -
Dere06g0556 384 Pfam Mitochondrial carrier protein 77 142 IPR018108 -
Dere06g0556 384 MobiDBLite consensus disorder prediction 320 343 - -
Dere06g0556 384 SUPERFAMILY Mitochondrial carrier 78 210 IPR023395 -
Dere06g0556 384 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 158 IPR018108 -
Dere06g0556 384 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 55 139 IPR044677 GO:0005315|GO:1990547
Dere06g0556 384 Gene3D Mitochondrial carrier domain 75 215 IPR023395 -
Dere06g0556 384 Pfam PHL domain 222 281 IPR046467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0556 Dere-ChrDere06 8857910 8859420 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0556 7 212 Chloroplast and Mitochondria Gene Families AT5G14040 60.669 6.45e-88 269