Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0554 ATGATGGAGATGGCTTTGAGAGACGAAGTTTGTGGTATCGATAGTGGTCCATTGGTAGTTGGGGAAGAAAGTAATACATTGAAGTCCTTGCGATTTACTTTGGCTACAATTGAAGCTGCAACAAACAAGTTTTCAGATGACAACAGGATCGGCAAAGGTGGATTTGGTGAAGTTTACAAGGGTATTCTTCTAGATGGACGAGAAGTAGCTGTGAAGAGACTTTCAAAAAATTCTGGGCAAGGAACATTAGAATTCAAGAATGAAGTTATACTAATAGCTAAACTTCAACATAGAAATCTAGTAGCCTTATTAGGATTTTGCTTGGAAGAACAAGAGAAAATACTTATATATGAATATGTGCATAACAAGAGTATTGATTGCTTTTTATTCGATTTTGATAAGCGAAGAGTGTTAAATTGGTCTGAGCGGTTCAAGATCCTGAAAGGAATTGCTCGAGGCCTTCTTTACTTACATGACCATTCACGACTGAAAGTTATTCATCGTGATCTCAAGCCTAGCAATATTTTATTAGATAGAAGTATGAATCCAAAAATATCAGATTTTGGTATGGCAAGGATGGTTCCCATTGATCAAGACCAAGGAAGTACTAATAGAATTGTTGGGACATATGGTTATATGTCTCCTGAATATATAATACATGGACAATTTTCAGAAAAGTCAGACGTTTTCAGCTTTGGTGTTATAACCTTAGAAGTAATTAGTGGCAAAAGGAATGCTAGATCTTATGAATCACACCTCCTAAGTCATGCTTGGAAACAATGGCATGATGAAACACCACTAGAAGTGCTGGATCCAATTCTAAGGGAATCTTGCTCTCAGACCGAGGTAATTAGATGTGTCCAGATTGGGTTATTATGTGTTCAAGAAAATCCTGATGATAGGCCTACAATGGCTGAAATTATTTCATATCTTAGTAATCTTTCGATTGAAATACAAAGTCCGAAGGAACCCGCGTTCTTCTTGCATGGTAGACATAATCCAAACATGGCAGCAACTTCTGGTTCTGGTCAGTCTTCACAGAGTTCCGAGCCGTCCTCTCTGAATGAAATGTCCAAGAGTGAGTTCTTCCCTCGATAG 1098 0.3789 MMEMALRDEVCGIDSGPLVVGEESNTLKSLRFTLATIEAATNKFSDDNRIGKGGFGEVYKGILLDGREVAVKRLSKNSGQGTLEFKNEVILIAKLQHRNLVALLGFCLEEQEKILIYEYVHNKSIDCFLFDFDKRRVLNWSERFKILKGIARGLLYLHDHSRLKVIHRDLKPSNILLDRSMNPKISDFGMARMVPIDQDQGSTNRIVGTYGYMSPEYIIHGQFSEKSDVFSFGVITLEVISGKRNARSYESHLLSHAWKQWHDETPLEVLDPILRESCSQTEVIRCVQIGLLCVQENPDDRPTMAEIISYLSNLSIEIQSPKEPAFFLHGRHNPNMAATSGSGQSSQSSEPSSLNEMSKSEFFPR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0554 365 Pfam Protein kinase domain 45 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0554 365 Gene3D Transferase(Phosphotransferase) domain 1 120 324 - -
Dere06g0554 365 MobiDBLite consensus disorder prediction 331 365 - -
Dere06g0554 365 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Dere06g0554 365 FunFam cysteine-rich receptor-like protein kinase 10 120 318 - -
Dere06g0554 365 SUPERFAMILY Protein kinase-like (PK-like) 28 336 IPR011009 -
Dere06g0554 365 MobiDBLite consensus disorder prediction 335 359 - -
Dere06g0554 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Dere06g0554 365 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 14 119 - -
Dere06g0554 365 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 361 - -
Dere06g0554 365 SMART serkin_6 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0554 365 Gene3D Phosphorylase Kinase; domain 1 19 119 - -
Dere06g0554 365 CDD STKc_IRAK 50 314 - -
Dere06g0554 365 ProSiteProfiles Protein kinase domain profile. 44 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0554 Dere-ChrDere06 8765116 8767213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0554 22 365 Receptor kinase-like Gene Family AT4G11480 55.271 1.66e-139 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere06g0554 Pkinase 1.4e-49 CL0016