Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0546 ATGGTGGCTACCCTTAAATACTGTGCAATTTTTTACACGTTGGTTTTCCTGTTTGGTTTTCTTAGCTTGGGAACCCTAGCAGCTCCTACCTTTCTTGCTTTTTCATGCACAAACAATACCACCTACGCTCCTGATAGCAAATTTCATGGTAATCTCAATGCCCTCCTCAATTCCCTTGCTACAAACTCCTCCCAAGTTAAGGGCTATTACACCGTCATGGGCTTTGGATTTGCCGAAGCCGTAAATGGACTTTTCAACTGCCGGGGAGACCTCAACGCCAGCTCGTGTCAGGAGTGTGTTGCCGGTGCCGCAGCCAAAGAGATAACGCAGCGATGCCCTAACCAGACGGAGGCCATCATCTGGTATGAGGAGTGCATGCTGCGTTACACAGACAGGTACTTCAAGTTTGCCAGCACCGACCCGGGGACGAACTTGGTGGAGGGGAAGAACATCTCCGGCAACAACTTGAATGCATTTAATCAATCGTTGTTCAGCTTGTTGAATAACCTATCAGGACAAGCTGCGAATTCTCAGTCGGCCGAGAAGTTCGCCACCGGCGAAGTCAAGTTTGGCGGCAACCAGACGCTGTATGGGTTGGAGCAGTGCACGATTGACATAACGGCGGCTCAGTGTGAGACTTGCCTAAAAAATGCCATCGGAACTTTTCCGGCGTGTTGTAATAGGAGTGGAGGAGCTAGAGCTCTGCTTGCGTCCTGTGTTGTCCGATATGAACTGTATCCATTTTACAATTCATCCAGTTCATCATTGACACCTTCAGGGAAAAAGAAACTTCAACCACGGACAGTTGCCTTGATTGTTGTCCTTGTTGTGGTCTCAGTAATTCTCTTAGGCTTTGGCAGCTTTTGGCTACTGAGAAGATCAAGGAAGAATCAAAGGACTATTTTAAGGGAAAATTTTGGGGAAGAAATGTCTACTTTAGAGTCATTGCAATTCAGTTTGGCTACAATTGAAGCTGCCACAAATAAGTTTTCACAGGAGAAAAAAATTGGCAGAGGTGGATTTGGAGAAGTTTATAAGGGAACTCTTCAAGATGGACGAGAAATAGCAGTAAAGAAACTTTCAAGAAGTTCTGGACAAGGTGCTACCGAATTTAAGAATGAAATTTTATTAATTGCCAAGCTACAGCATAGGAACTTGGTGGCCTTGCTAGGATTTTGCTTGGAAGAACGAGAGAAGATGCTTATTTATGAATATGTGCCCAACAAGAGCCTCGACTACTTTTTATTCAATCCCAAAAAACAGAGGGTGCTGAATTGGTTTGAACGTTACAAAATCATAGGAGGAATTGCAAGAGGAATTCATTATTTACATGAGCATTCCCGGCTCAAAGTCATACATCGTGATCTTAAACCAAGCAATGTGTTATTAGATGATAACTTGAACCCAAAAATCTCTGACTTTGGCATGGCAAGAATAGTTGCTATAGATCAAGATCAAGGAAGTACCAATAGAATTGTTGGAACTTATGGTTACATGTCTCCAGAATATGCAATGCATGGGCAATTTTCAGAGAAGTCAGATGTATTCAGTTTTGGTGTCATAGTTCTTGAGATTCTTAGTGCAAAAAGAAATGCTCGTCCTATTGAAACGCAAGATCTTGATGACCTCTTAAGTCAAGCTTGGAAACACTGGGGGAATCAGACACCACTAGAAATACTGGACCCAGAGCTAAAAGATTCATTTTCTCACAGTGAAGTGATCAAGTGCATCCAAATAGGATTATTATGCGTTCAAGAAAACCCAGAAAATAGACCCACGATGGCTAGAGTTGTCTCATATCTCAGTAGCCTTCTAGTTGAATTGTCTTTGCCTAGAGAACCAGCATTTTTCATGGATACTGATATGAAGATGAATTTGGTATCATGGGAATCGAGTTCAGGTCAATCTACCTATAATTCTCTGACATCCTCTATCCATGAAATGTCTAAGAGTAATCAATTTCCAAGATAG 1971 0.4247 MVATLKYCAIFYTLVFLFGFLSLGTLAAPTFLAFSCTNNTTYAPDSKFHGNLNALLNSLATNSSQVKGYYTVMGFGFAEAVNGLFNCRGDLNASSCQECVAGAAAKEITQRCPNQTEAIIWYEECMLRYTDRYFKFASTDPGTNLVEGKNISGNNLNAFNQSLFSLLNNLSGQAANSQSAEKFATGEVKFGGNQTLYGLEQCTIDITAAQCETCLKNAIGTFPACCNRSGGARALLASCVVRYELYPFYNSSSSSLTPSGKKKLQPRTVALIVVLVVVSVILLGFGSFWLLRRSRKNQRTILRENFGEEMSTLESLQFSLATIEAATNKFSQEKKIGRGGFGEVYKGTLQDGREIAVKKLSRSSGQGATEFKNEILLIAKLQHRNLVALLGFCLEEREKMLIYEYVPNKSLDYFLFNPKKQRVLNWFERYKIIGGIARGIHYLHEHSRLKVIHRDLKPSNVLLDDNLNPKISDFGMARIVAIDQDQGSTNRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVIVLEILSAKRNARPIETQDLDDLLSQAWKHWGNQTPLEILDPELKDSFSHSEVIKCIQIGLLCVQENPENRPTMARVVSYLSSLLVELSLPREPAFFMDTDMKMNLVSWESSSGQSTYNSLTSSIHEMSKSNQFPR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0546 656 ProSiteProfiles Protein kinase domain profile. 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0546 656 SUPERFAMILY Protein kinase-like (PK-like) 315 631 IPR011009 -
Dere06g0546 656 FunFam cysteine-rich receptor-like protein kinase 10 406 608 - -
Dere06g0546 656 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Dere06g0546 656 Gene3D Transferase(Phosphotransferase) domain 1 406 611 - -
Dere06g0546 656 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 645 - -
Dere06g0546 656 SMART serkin_6 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0546 656 Gene3D Phosphorylase Kinase; domain 1 292 405 - -
Dere06g0546 656 CDD STKc_IRAK 336 598 - -
Dere06g0546 656 Gene3D - 143 248 IPR038408 -
Dere06g0546 656 Gene3D - 29 134 IPR038408 -
Dere06g0546 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Dere06g0546 656 FunFam Cysteine-rich receptor-like protein kinase 10 143 248 - -
Dere06g0546 656 Pfam Salt stress response/antifungal 155 246 IPR002902 -
Dere06g0546 656 Pfam Salt stress response/antifungal 36 131 IPR002902 -
Dere06g0546 656 ProSiteProfiles Gnk2-homologous domain profile. 139 248 IPR002902 -
Dere06g0546 656 FunFam Cysteine-rich receptor-like protein kinase 28 32 133 - -
Dere06g0546 656 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 291 405 - -
Dere06g0546 656 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Dere06g0546 656 Pfam Protein kinase domain 330 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0546 Dere-ChrDere06 8441590 8445802 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0546 15 656 Receptor kinase-like Gene Family AT4G05200 46.847 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere06g0546 Pkinase 6.5e-50 CL0016