Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0544 ATGACAACGTCTATCATTTCTTTGTCACTTTTTTCATTCCTTTCTCATCTTACCATTCTCACAGCCCAGCAGCCTCCCGTTTTCCGATATAGCCAGTGTTTCAATGAGAAAGGTAACTATACAAATACAAGTACCTACCACACCAACCTGAAAATCCTTCTTTCAGATCTCACTTCCAACACAAAAATTGACTATGGCTTCTACAATATCTCTCGTGGCCAAAATCCTGACAGAATTAGCGCAATTGGATTATGCAGAGGAGACGTTAAGCAAGATGTATGCCGTGGTTGCCTCAACAATGCCTCAATTCTTCTCCCACAGCTGTGTCCAAATCAGAAGGAGGCCATGGGGGGCTATGACGAATGCATGCTACGATACTCAAACCGTTCAATATTTGGAGTCATGGATTCTGGCTTTTCGTACTATTTGTGGAACATAAACAATGCAACAGAGACGGAGAAGTTCAATCAAGTGGTTAGTGAGTTATTGGGAAGACTAAGAGGCAAGGCTGCGGCTGGAGATTCACTTCGGAAGTTTGCTGCTGCAAATGAAACGGGTCCAAACTTCCAATATGTATATGCTTATGTTCAGTGCACTCCAGATTTGTCCGAGCAAGATTGCACCGATTGCTTGGTGAAAGCTATCTCAGAAATCTCAGATTGTTGTTCGACAAAGAGAGGAGGTAGGGTTATCAAACTCAGCTGCAATATTAGGTATGAGAACTATCGCTTCTATGATCCTATAGCTGAGGATTCATCACCACCAGCATCTCCTCTTCCTCCCTCAATTCCAACGGCGACCTCAGAAGGAAATGGTAACAAATCAAAAACTATCATTGTCATAGTTGTGCCGGTTTTTGCCGTTATCTTACTACTCATCATAATCTGCATCTATTTTGGAGTGAGAAAACCTAAGGAAACAAATCAAATTGAAGCTGAAAAGGATAGTGAAATTCAACCCGCTGAGTCACTGCAATTAGACTTTGACACCATCAGACTTGCTACGGATAATTTCTCTGACGCAAACAAGCTTGGACAAGGTGGATTTGGGCCAGTTTACAAGGGTAGGCTCTACAATGGACAAGAAGTTGCCGTCAAAAGGTTATCCAAGGATTCTGGGCAAGGAGATCTAGAATTTAAGAACGAAGTAATGTTGGTGGCCAAGCTTCAGCATCGCAATTTAGTAAGACTACTTGGATTTTGCTTGGAAAGAAAGGAAAGGCTACTTATCTATGAATTTCTTCCTAATAAAAGTCTTGATTACTTATTATTTGACCCAAACCAACGTGCTCATTTGAACTGGGAAGTGCGATACAAAATCATAGGAGGCATTGCTCGTGGCCTTCTTTACCTTCATGATGATTCAAGATTACGTATCATACATCGTGATCTCAAAGCAAGTAATATTCTTTTAGATGAAGAGTTGAACCCCAAAATATCTGATTTTGGCATGGCAAAACTATTTGTCGTGGATCAAACTCAAAGCAATACTAGTAGAATTGTTGGAACATATGGATATATGGCACCTGAATATGCAATGCATGGACAATTCTCACTCAAATCAGATGTCTTTAGTTTTGGTGTGCTGGTTTTAGAGATTGTAAGTGGCAGAAGAAACAATACCATTTTTCGTGAAGAGAATGTACAAGATCTATTAAGCTTTGCTTGGAAAAACTGGAGGGAAGGGATGGCCTCAAATATTGTAGATCCTATATTAAACAATTATCCAAGAAATGAAATAATGAGATGCATCCACATTGGACTACTTTGCGTTCAAGAAAATGTAGCCGACAGGCCAACCATGGCTTCTATTACACTTATGCTTAACAGCTACTCTTTCTCTCTCCCTTTACCTTTGCATCCTCCATTTGCAATGAATAATAGCAGTTCATCAGAGATGCATTTGAGGGAGAACAGTTCAGGGGCATCAGGATCAAGGGAACAAAGAAGTAACTCTATTCAGTCATTAAGTGGACAAGAAAATAGCTCCGTTCAAGCCTCAGAAAATGAGGCATCAATTACCGAACTATTCCCTCGTTAG 2040 0.4044 MTTSIISLSLFSFLSHLTILTAQQPPVFRYSQCFNEKGNYTNTSTYHTNLKILLSDLTSNTKIDYGFYNISRGQNPDRISAIGLCRGDVKQDVCRGCLNNASILLPQLCPNQKEAMGGYDECMLRYSNRSIFGVMDSGFSYYLWNINNATETEKFNQVVSELLGRLRGKAAAGDSLRKFAAANETGPNFQYVYAYVQCTPDLSEQDCTDCLVKAISEISDCCSTKRGGRVIKLSCNIRYENYRFYDPIAEDSSPPASPLPPSIPTATSEGNGNKSKTIIVIVVPVFAVILLLIIICIYFGVRKPKETNQIEAEKDSEIQPAESLQLDFDTIRLATDNFSDANKLGQGGFGPVYKGRLYNGQEVAVKRLSKDSGQGDLEFKNEVMLVAKLQHRNLVRLLGFCLERKERLLIYEFLPNKSLDYLLFDPNQRAHLNWEVRYKIIGGIARGLLYLHDDSRLRIIHRDLKASNILLDEELNPKISDFGMAKLFVVDQTQSNTSRIVGTYGYMAPEYAMHGQFSLKSDVFSFGVLVLEIVSGRRNNTIFREENVQDLLSFAWKNWREGMASNIVDPILNNYPRNEIMRCIHIGLLCVQENVADRPTMASITLMLNSYSFSLPLPLHPPFAMNNSSSSEMHLRENSSGASGSREQRSNSIQSLSGQENSSVQASENEASITELFPR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0544 679 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Dere06g0544 679 Pfam Protein tyrosine and serine/threonine kinase 342 605 IPR001245 GO:0004672|GO:0006468
Dere06g0544 679 ProSiteProfiles Protein kinase domain profile. 338 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0544 679 Gene3D Phosphorylase Kinase; domain 1 300 413 - -
Dere06g0544 679 FunFam cysteine-rich receptor-like protein kinase 10 414 615 - -
Dere06g0544 679 MobiDBLite consensus disorder prediction 251 270 - -
Dere06g0544 679 Pfam Salt stress response/antifungal 147 242 IPR002902 -
Dere06g0544 679 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Dere06g0544 679 FunFam Cysteine-rich receptor-like protein kinase 10 139 244 - -
Dere06g0544 679 Gene3D Transferase(Phosphotransferase) domain 1 414 614 - -
Dere06g0544 679 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 131 - -
Dere06g0544 679 CDD STKc_IRAK 344 609 - -
Dere06g0544 679 MobiDBLite consensus disorder prediction 628 679 - -
Dere06g0544 679 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Dere06g0544 679 FunFam Cysteine-rich receptor-like protein kinase 17 307 413 - -
Dere06g0544 679 SUPERFAMILY Protein kinase-like (PK-like) 325 634 IPR011009 -
Dere06g0544 679 Gene3D - 27 130 IPR038408 -
Dere06g0544 679 Gene3D - 136 244 IPR038408 -
Dere06g0544 679 MobiDBLite consensus disorder prediction 628 672 - -
Dere06g0544 679 SMART serkin_6 338 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0544 679 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 655 - -
Dere06g0544 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0544 Dere-ChrDere06 8385237 8388936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0544 10 632 Receptor kinase-like Gene Family AT4G21410 50.685 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere06g0544 PK_Tyr_Ser-Thr 4.6e-46 CL0016