Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0537 ATGGCTAGAGCTTCTTTAACACTGCTTTCAGTTCTATGTCTCCTTGTCATTCTGGTATACCAAGCCACTAGCCAGCCAGAATTTCGATACCATCATTGCAGCAATAGCAAAAACTACACGGCAAATAGCACGTACAAGACCAACCTCAATACTCTTTTATCAAATCTCACTTCCAACAAACAAATTGACTATGGCTTCTACAATCTCTCTCATGGTAAATACCCTGATACAGTCTATGCAGTTGGGCTATGTAGAGGAGATGTTACGCCAGATTTTTGCCGTAGCTGCCTCACCAATTGTACAGTCCTGCCACAGCGGTGTCCATATCAGAAGCAGGCTATGGGATTCTACGATGAATGCATTTTATACTACTCAGACACCTCAGACACCTCAGAGTCTATTACTGTCCATATGTGGAGCCTAATCAGTGCAACAAATTGGGATCAGTACAATCAGGTCCTTAGGGGTTTGCTTCGAAATATAAGTGGGAGAGCTGCATCTGGTGACTCTCGTCTTAAGTTTGCTGCAGGAAATGCAGCAGGACCAAGCCTTCAAACCATATATGCTGCTGTTCAGTGCACACCTAATTTGAATGAGCCAGAATGCAACAACTGCTTGGTTGGGGCGATCTCGGAAATCCCAGAGTGTTGTAATGGCAAGTCAGGTGGTAGAGTTATCAAATCAACCTGTAACTTTAGATACGAGAGCCACCGCTTCTATGAAATTGCAGCTGATGTACCTTTATCAGCACCATCACCCCAAGTGTCTCCTCCTCCTCCTCCTTCTCCGCTTATATCGTCGTCACCTCCTCCAACTACCGATGTAACATCCTCAAAAGGAAAAAACCAGAAATCACATACTGCCATTGCCATAGTTGTGCCTACCGTTGCCTTGGTTGTGCTGCTTAACTTTATTTGGATCTGTGTAAGAGTGAGAAAGCGAAGAAAACATTTTCAAAGTGAGCCTGAAGATGATGATGCAATTGAACTTACTGAGTCAATACAATTCGAATTTGACACCATCAAAGTTGCTACTGATAACTTCTCTGATGCAAATAAGCTTGGACAAGGTGGATTTGGACCAGTTTACAAGGGTAGGCTCTCCAATGAAAAAAAGATCGCTGTCAAAAGGTTGTCTAGGGATTCTGGGCAAGGAGACATTGAATTCAAGAATGAAGTGCTATTAATGGCCAGGCTTCAACACCGAAATTTAGTTAGACTCCTTGGTTTTTGTTTGAAACAAAAGGAAAGGCTACTAATATACGAGTTTCTTCCCAATAAAAGTCTTGATTACTTCATATTCGATCCTATTCGACGTGCACATGGATATATGGCACCAGAGTATTTAAGGCATGGACAAATTTCAATGAAGTCGGATGTATTCAGTTTTGGTGTACTAATTCTAGAGATTGTAAGTGGCCAGAAGAATGGTGGCTTACGTAATGGGGAGAATGTAGAGCATCTACTAAGCTTTGCATGGAACAGCTGGAGGAAAGGGACAGCCTCTAATATTGTAGATCCGACTTTAAAAGATGGTTCAAGAAATGAAATAATGAGATGCCTGCACATTGGCTTACTCTGTGTTCAAGAAAAGGCTGTCAACAGACCAACCTTGGCTTCACTTGTGCTTATGCTTAACAGCCACTCTTTCTCACTTCCAGTACCCTTGCAACCTGCATTTTTTATGAATAGTATAAGTTTATCAGGCGAACAATCTAGGGAATACAGTTCTCTGTCAGCAAGCTCAAGCGAACAGAGAAGCAAATCTGAAGTAATATCTGTAAATGAGGACACAATAACCGATATATATCCTCGATAG 1818 0.4191 MARASLTLLSVLCLLVILVYQATSQPEFRYHHCSNSKNYTANSTYKTNLNTLLSNLTSNKQIDYGFYNLSHGKYPDTVYAVGLCRGDVTPDFCRSCLTNCTVLPQRCPYQKQAMGFYDECILYYSDTSDTSESITVHMWSLISATNWDQYNQVLRGLLRNISGRAASGDSRLKFAAGNAAGPSLQTIYAAVQCTPNLNEPECNNCLVGAISEIPECCNGKSGGRVIKSTCNFRYESHRFYEIAADVPLSAPSPQVSPPPPPSPLISSSPPPTTDVTSSKGKNQKSHTAIAIVVPTVALVVLLNFIWICVRVRKRRKHFQSEPEDDDAIELTESIQFEFDTIKVATDNFSDANKLGQGGFGPVYKGRLSNEKKIAVKRLSRDSGQGDIEFKNEVLLMARLQHRNLVRLLGFCLKQKERLLIYEFLPNKSLDYFIFDPIRRAHGYMAPEYLRHGQISMKSDVFSFGVLILEIVSGQKNGGLRNGENVEHLLSFAWNSWRKGTASNIVDPTLKDGSRNEIMRCLHIGLLCVQEKAVNRPTLASLVLMLNSHSFSLPVPLQPAFFMNSISLSGEQSREYSSLSASSSEQRSKSEVISVNEDTITDIYPR 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0537 605 ProSiteProfiles Gnk2-homologous domain profile. 27 129 IPR002902 -
Dere06g0537 605 MobiDBLite consensus disorder prediction 250 281 - -
Dere06g0537 605 Gene3D Transferase(Phosphotransferase) domain 1 424 551 - -
Dere06g0537 605 ProSiteProfiles Gnk2-homologous domain profile. 132 239 IPR002902 -
Dere06g0537 605 ProSiteProfiles Protein kinase domain profile. 348 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0537 605 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 128 - -
Dere06g0537 605 Gene3D - 131 239 IPR038408 -
Dere06g0537 605 Gene3D - 26 128 IPR038408 -
Dere06g0537 605 MobiDBLite consensus disorder prediction 251 268 - -
Dere06g0537 605 FunFam Cysteine-rich receptor-like protein kinase 10 134 239 - -
Dere06g0537 605 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 439 - -
Dere06g0537 605 FunFam Cysteine-rich receptor-like protein kinase 10 311 423 - -
Dere06g0537 605 Pfam Salt stress response/antifungal 33 126 IPR002902 -
Dere06g0537 605 Pfam Salt stress response/antifungal 146 236 IPR002902 -
Dere06g0537 605 SUPERFAMILY Protein kinase-like (PK-like) 336 584 IPR011009 -
Dere06g0537 605 Pfam Protein tyrosine and serine/threonine kinase 352 433 IPR001245 GO:0004672|GO:0006468
Dere06g0537 605 Pfam Protein tyrosine and serine/threonine kinase 442 542 IPR001245 GO:0004672|GO:0006468
Dere06g0537 605 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0537 Dere-ChrDere06 8156002 8158948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0537 441 605 Receptor kinase-like Gene Family AT4G05200 38.922 1.40e-34 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere06g0537 PK_Tyr_Ser-Thr 7.9e-08 CL0016