Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0531 ATGGCTAGAGCTTCTTTAACACTGCTTTCAGTTCTATGTCTCCTTGTCATTCTGGTATACCAAGCCACTAGCCAGCCAGCATTTCGAAACCATCATTGCTCCAATATCAAAAACTACACGGCAAATAGCACGTACAAGACCAACCTCAATACTCTTTTATCAAATCTCACTTCCAACAAACAAATTGACTATGGCTTCTACAATCTCTCTTATGGTAAATACCCTGATACAGTCTATGCAGTTGGGCTATGTAGAGGAGATGTTACGCCAGAATTTTGCCGTGGCTGCCTCACCAATTGTACAGTCCTGCCACGGCGGTGTCCATATCAGAAGCAGGCTATGGGATTCTACGATGAATGCATGTTATACTACTCAGACACCTCAGACACCTCAGAATCTATTACTCTCTATATGTGGAGCCTATTCAGTGCAACAAATTGGGATCAGTACAATCAGGTTCTTAGGGGTTTGCTTCGAAATATAAGTAGGAGAGCTGCATCTGGTGACTCTCGTCTTAAGTTTGCCGCAGGAGATGAAGCAGGAACAAGCCTTCAAACCATATATGCTGCTGTTCAGTGCACACCTAATTTGAATGAGTCAGAATGCAACAACTGCTTGGTTGGGGCGATCTCAGAAATCCCACAGTGTTGTTATGGCAAGTCAGGTGGTAGAGTCATGAAATCAACCTGTAACTTTAGATACGAGAGCGGCCGCTTCTATGAAATTGCAGCTGATGTACCTTTACCAGCACCATCACCCCAAGTGTCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCACCTCCTCCTCCATCTCCGCTTATATCGTCGTCACCTCCTCCAACTGCCGATGTAACATCCTCAAAAGGAAAAAGCCAGAAATCACATACTGCCATTGCCATAGTTGTGCCTACCGTTGCCTTGGTTGTGCTGCTTAACTTTATTTGGATCTGTGTAAGAGTGAGAAAGCGAAGAAAACATTTTCAAAGTGAGCCTGAAGATGATGATGCAATTGAACTTACTGAGTCAATACAATTCGAATTTGACACCATCAAAGTTGCTACTGATAACTTCTCTGATGCAAATAAACTTGGACAAGGTGGATTTGGACCAGTTTACAAGGGTAGGCTCTCCAATGAAAAAAAGATCGCTGTCAAAAGGTTGTCTAGGGATTCTGGGCAAGGAGACATTGAATTCCAGAATGAAGTACTATTAATGGCCAGGCTTCAACACCGAAATTTAGTTAGACTCCTTGGTTTTTGTTTGAAACAAAAAGAAAGGCTACTACTATACGAGTTTCTTCCTAATAGAAGTCTTGATTACTTCATATTCGATCCTATTAGACGTGCACATGGATATATGGCACCAGAGTATGCAAAGCATGGACAATTTTCAATGAAGTCGGATGTATTCAGTTTTGGTGTACTAATTCTAGAGATTGCATGGAAAAGCTGGAGGAAAGGGACAGCCTCTAATATTGTAGATCCGACATTAAAAGATGGTTTAAGAAATGAAATAATGAGATGCCTGCACATTGGCTTACTCTGTGTTCAAGAAAAGGCTGTCAACAGACCAACCTTGGCTTCACCCTTGGCTTCACTTGTGCTTATGCTTAACAGCCACTCTTTCTCACTTCCAGTACCCTTGCAACCTGCATTTTATATGAATAATATTAGTTTATCAGGCGAACAATCTAGGGAATACAGTTCTCTATCGGCAAGCTCAAGCGAACAGAGAAACAAATCTGAAGTAATATCCGTAAATGAGGACTCAATAACCGATATATATCCTCAATAA 1794 0.4197 MARASLTLLSVLCLLVILVYQATSQPAFRNHHCSNIKNYTANSTYKTNLNTLLSNLTSNKQIDYGFYNLSYGKYPDTVYAVGLCRGDVTPEFCRGCLTNCTVLPRRCPYQKQAMGFYDECMLYYSDTSDTSESITLYMWSLFSATNWDQYNQVLRGLLRNISRRAASGDSRLKFAAGDEAGTSLQTIYAAVQCTPNLNESECNNCLVGAISEIPQCCYGKSGGRVMKSTCNFRYESGRFYEIAADVPLPAPSPQVSLPPPPPPPPPPPPPSPLISSSPPPTADVTSSKGKSQKSHTAIAIVVPTVALVVLLNFIWICVRVRKRRKHFQSEPEDDDAIELTESIQFEFDTIKVATDNFSDANKLGQGGFGPVYKGRLSNEKKIAVKRLSRDSGQGDIEFQNEVLLMARLQHRNLVRLLGFCLKQKERLLLYEFLPNRSLDYFIFDPIRRAHGYMAPEYAKHGQFSMKSDVFSFGVLILEIAWKSWRKGTASNIVDPTLKDGLRNEIMRCLHIGLLCVQEKAVNRPTLASPLASLVLMLNSHSFSLPVPLQPAFYMNNISLSGEQSREYSSLSASSSEQRNKSEVISVNEDSITDIYPQ 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0531 597 Gene3D - 132 239 IPR038408 -
Dere06g0531 597 Gene3D - 26 128 IPR038408 -
Dere06g0531 597 ProSiteProfiles Gnk2-homologous domain profile. 132 239 IPR002902 -
Dere06g0531 597 Pfam Proline-rich membrane anchor 1 258 325 - -
Dere06g0531 597 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 448 - -
Dere06g0531 597 FunFam Cysteine-rich receptor-like protein kinase 10 320 432 - -
Dere06g0531 597 SUPERFAMILY Formin homology 2 domain (FH2 domain) 259 268 - -
Dere06g0531 597 MobiDBLite consensus disorder prediction 568 597 - -
Dere06g0531 597 Pfam Salt stress response/antifungal 146 236 IPR002902 -
Dere06g0531 597 Pfam Salt stress response/antifungal 33 126 IPR002902 -
Dere06g0531 597 Gene3D Phosphorylase Kinase; domain 1 318 432 - -
Dere06g0531 597 MobiDBLite consensus disorder prediction 250 290 - -
Dere06g0531 597 FunFam Cysteine-rich receptor-like protein kinase 10 134 239 - -
Dere06g0531 597 ProSiteProfiles Gnk2-homologous domain profile. 27 129 IPR002902 -
Dere06g0531 597 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 128 - -
Dere06g0531 597 Gene3D Transferase(Phosphotransferase) domain 1 433 543 - -
Dere06g0531 597 Pfam Protein tyrosine and serine/threonine kinase 361 442 IPR001245 GO:0004672|GO:0006468
Dere06g0531 597 Pfam Protein tyrosine and serine/threonine kinase 451 525 IPR001245 GO:0004672|GO:0006468
Dere06g0531 597 ProSiteProfiles Protein kinase domain profile. 357 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0531 597 SUPERFAMILY Protein kinase-like (PK-like) 345 570 IPR011009 -
Dere06g0531 597 MobiDBLite consensus disorder prediction 251 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0531 Dere-ChrDere06 8098962 8101943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0531 446 576 Receptor kinase-like Gene Family AT4G21410 46.753 5.25e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere06g0531 PK_Tyr_Ser-Thr 4.2e-07 CL0016