Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0505 ATGTCTCAGTCGTCGGAGTACTCCACAGCTGGAAGCTTGTTCTGCTGCGAGGACGCCGCCGATGTGGTGTCTTCCGGCGAAGACACGTCGATCTCGGACCGCCCTCCGTCATCGTCCCTCCCGCCCTACTTTCCGCCGTCCGAGGATACCGTTGTCGGCGAACTCATCGACGTAGAGACACATCACATGCCCAGCCCAGGTTATTCTCAACGCCTCCGTGACCGTTCGATGGACGTCAGCAATCGCCAAAACTCCGTTAACTGGATCTTAAAGGTGCACGCGTATTACCAGTTTCGACCTGTCACGGCGTTTCTCTCCGTCAACTATTTAGACCGTTTTCTCTCGTGCTCTACTCTTCCGCGACCAAGTGGGTGGCCGTTTCAGCTATTATCAGTGGCTTGTTTGTCTCTAGCGGCGAAAATGGAGGAGCCTCAAGTCCCGAACTTGCTAGACCTACAATTATACGAACCCAGCTTCGTCTTCGAACCCAAGACGGTTCAGAGAATGGAGCTTCGGGTCATGGCCTATCTCAACTGGAGATTACGCTCCGTTACGCCCTTCGATTACCTCCCTTACTTCATCTCCAAGCTCCCTACTTCCTCCTCCAACCCAAAACCGGAATCCCTGGCCCGGTTCTTCTCAAATGCATCAGATTTCATCCTTAGCACCACTCGTGTTATTGACTTCTTGAGATTTCAACCGTCCACCGTTGCAGCTGCCGCCGTGCTCTGCTCAGCCGGCGTAGGCCATGATATGCGCCACCGAGGGCCGCCGTGCTTTCATGACAGAGTAAACAAAGAAATGGTGGGAAGCTGTCATCAACTAATGGAAACGTACGTGGCTGACACGTGTCGTAGAGCCGAGGCGGCTCCTCCTTCAAGTCCGGTCGGCGTGCTCGACGCCGCTACTTGTGGAAGCTGCGACACTCGTACCGAGAACCCTGGCTCGATCAGCCAAGCCGATGAGCCGTCCAGGAAGCGGCTGCGATCTTCTGCGCCGGATTGTAATAATAGTTTAGCTTTAGCACCATGTGACTCTGTTGGTGGGAATGGGATTACCGAGATTGGACATGACATATCACAAGAGGGGAAGGATAAAAGTGTAAATGAGAATGACCCTCGCTTTCCGGATATTTGTACTGGTGTCCCCCATGTGGGCGAGAAGGGGGCGCAGTGTGGACATGTGAAATCTGGGGTGGGACAAGGAGGGTGGGGACCGCAGAGGGAAATGGGGGCCCACAATACAGGGTTTAGAAATGAAGTAAGAAGAGAGACAGGGGATCTTGAAAAAGTGAAGGAGAGGAGGGTGAGGGTATCTAGGACCTCTCCCTGGGAAACAGCCAAAGCATGA 1350 0.5385 MSQSSEYSTAGSLFCCEDAADVVSSGEDTSISDRPPSSSLPPYFPPSEDTVVGELIDVETHHMPSPGYSQRLRDRSMDVSNRQNSVNWILKVHAYYQFRPVTAFLSVNYLDRFLSCSTLPRPSGWPFQLLSVACLSLAAKMEEPQVPNLLDLQLYEPSFVFEPKTVQRMELRVMAYLNWRLRSVTPFDYLPYFISKLPTSSSNPKPESLARFFSNASDFILSTTRVIDFLRFQPSTVAAAAVLCSAGVGHDMRHRGPPCFHDRVNKEMVGSCHQLMETYVADTCRRAEAAPPSSPVGVLDAATCGSCDTRTENPGSISQADEPSRKRLRSSAPDCNNSLALAPCDSVGGNGITEIGHDISQEGKDKSVNENDPRFPDICTGVPHVGEKGAQCGHVKSGVGQGGWGPQREMGAHNTGFRNEVRRETGDLEKVKERRVRVSRTSPWETAKA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0505 449 MobiDBLite consensus disorder prediction 415 441 - -
Dere06g0505 449 SUPERFAMILY Cyclin-like 44 181 IPR036915 -
Dere06g0505 449 CDD CYCLIN_AtCycD-like_rpt1 81 179 - -
Dere06g0505 449 SMART cyclin_7 87 175 IPR013763 -
Dere06g0505 449 FunFam D6-type cyclin 181 274 - -
Dere06g0505 449 CDD CYCLIN_AtCycD-like_rpt2 184 276 - -
Dere06g0505 449 Gene3D - 65 182 - -
Dere06g0505 449 Gene3D - 55 246 - -
Dere06g0505 449 MobiDBLite consensus disorder prediction 25 45 - -
Dere06g0505 449 MobiDBLite consensus disorder prediction 310 334 - -
Dere06g0505 449 PANTHER CYCLINS 69 277 IPR039361 -
Dere06g0505 449 FunFam D2/4-type cyclin 65 180 - -
Dere06g0505 449 MobiDBLite consensus disorder prediction 398 449 - -
Dere06g0505 449 Pfam Cyclin, C-terminal domain 184 280 IPR004367 -
Dere06g0505 449 ProSitePatterns Cyclins signature. 82 113 IPR006671 -
Dere06g0505 449 SMART Cyclin_C_2 184 307 IPR004367 -
Dere06g0505 449 Pfam Cyclin, N-terminal domain 55 181 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0505 Dere-ChrDere06 7701919 7708294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0505 1 285 Core Cell Cycle Gene Families AT1G70210 42.414 2.37e-70 224