LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere06g0478	ATGGAGTCTTGGTTCATTGTCCTCGTCTCCCTCTGTCTCTGCCTCTGCATCAGAGCTCTTTTCAATCTTCTCTTTCCTTCTCGGTCCCCTCCTCTCCCTCCTGGACCTCTCCATCTTCCAATCATCGGTTCTCTTCTTTTGCTACGCAAATCATCCTCAGAACTCGAAGTAATTCTCCGAAACCTTCATGCCAAGTATGGTCCCATCGTCACTCTCCCTTTTGGCTCTTGTCCTGCTATTTTCGTAGCTGATCGATCTCTCGCCCACCAAGCCCTCGTTCAGAACGGCGCCGTCTTCTCCAACCGCCCCAAGTCTCTCGCTACCGATAGGTTCGTCAACAGTGACCAACATAACATCACCTCTGCTTTCTACGGCCCCACATGGCGCGTGCTCCGTCGCAACCTCACTTCAGAGATACTTCACCCGGCCCGGATCAAATCCCTTTCGGGTGCCCGAAAATGGGTTCTAGACGTGCTTCTCGATCGCCTCCAATCTGAGTCACAATCCCGCAAACCCATTAGGGTCGTTGACCATATCCAGTATGCTATGTTCTGCTTGCTGGTGTACATGTGCTTCGGTGAAGGATTAGATGAGAAGCAAATCAAGGATGTTGAATATGTTCAGCATCGTTTTCTTGTGACCTTCAGCAGGTTCAATATGCTTAATTTCTGGCCAAGAGTCACTCGAATACTGTTCCGCAAGCGTTGGGAGGAACTGTTCCAACTTCGGAAGGAACAGGATGATGTGTTGATTCCGCTAATAAGAGCGAGAAAGAAAGCCAAGGAAGAGAGGTTGAGCAAAGCCAAAGAGGACAATAGGCAAGATGAAGTTGTGGTGTGTTATGTGGATACTCTGTTGGATTTGCAGTTGCCAGAGGAGAAGCGCAAGCTTGATGAAGGTGAACTCGTTACCATAAGTTCTGAGTTTCTGGATGCAGGGACAGATACAACAACTACCGCACTGCAATGGATTATGGCAAATTTGGTGAAGTACCCACATATCCAAGAAAGGCTTGTGGAGGAAATAAGATATGTAATGGGTGAGAGAGAAGATAAGGAAGTGAAAGAGGAAGATTTGAACAGAATGCCGTATCTCAAGGCTGTGATTTTGGAGGGACTAAGGCGACATCCTCCAGGGCATTTTGTGTTGCCACATGCAGTGTCAGAGGATACGGTTTTGAATGATTATTTGGTGCCTAAGAATGGGATTATAAATTTCATGGTGGCAGAGATGGGGTGGGACCCAAAGGTGTGGGAAAATCCAATGGAATTCAAACCAGAGAGGTTCTTGAATGGTGAAAAAAATGGAGGTGAAGCATATGATATTACGGGAAGTAAAGAGATAAAGATGATGCCATTTGGGGCAGGGAGAAGAATGTGTCCAGGCTATAATTTCGCTATGCTACATCTAGAATACTTCGTGGCTAATCTGGTTTGGAATTTTGAGTGGAAGGCTTCAAATGGTGATGTTGATTTGGCAGAAAACGAAGAATTCACTGTGGTAATGAAAAATCCATTACAGTTAGAACAGAGACTTGAGATCTTTGACAATGAGATGATTACTGCAGTGTTCATTGACTACAGTGAAGCTTCTTAA	1596	0.4574	MESWFIVLVSLCLCLCIRALFNLLFPSRSPPLPPGPLHLPIIGSLLLLRKSSSELEVILRNLHAKYGPIVTLPFGSCPAIFVADRSLAHQALVQNGAVFSNRPKSLATDRFVNSDQHNITSAFYGPTWRVLRRNLTSEILHPARIKSLSGARKWVLDVLLDRLQSESQSRKPIRVVDHIQYAMFCLLVYMCFGEGLDEKQIKDVEYVQHRFLVTFSRFNMLNFWPRVTRILFRKRWEELFQLRKEQDDVLIPLIRARKKAKEERLSKAKEDNRQDEVVVCYVDTLLDLQLPEEKRKLDEGELVTISSEFLDAGTDTTTTALQWIMANLVKYPHIQERLVEEIRYVMGEREDKEVKEEDLNRMPYLKAVILEGLRRHPPGHFVLPHAVSEDTVLNDYLVPKNGIINFMVAEMGWDPKVWENPMEFKPERFLNGEKNGGEAYDITGSKEIKMMPFGAGRRMCPGYNFAMLHLEYFVANLVWNFEWKASNGDVDLAENEEFTVVMKNPLQLEQRLEIFDNEMITAVFIDYSEAS	531

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere06g0478	531	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	453	462	IPR017972	GO:0005506\|GO:0016705
	Dere06g0478	531	SUPERFAMILY	Cytochrome P450	33	508	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dere06g0478	531	Gene3D	Cytochrome P450	27	515	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dere06g0478	531	CDD	CYP77_89	65	507	-	-
	Dere06g0478	531	PRINTS	P450 superfamily signature	460	471	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dere06g0478	531	PRINTS	P450 superfamily signature	451	460	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dere06g0478	531	PRINTS	P450 superfamily signature	312	329	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dere06g0478	531	PRINTS	P450 superfamily signature	367	378	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Dere06g0478	531	FunFam	Cytochrome P450 family protein	26	512	-	-
	Dere06g0478	531	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	11	506	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere06g0478	Dere-ChrDere06	7429882	7431809	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere06g0478	1	507	Cytochrome P450	AT1G64940	61.209	0.0	628

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