Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0459 ATGGAGGCTGCTGGGAGGATTTCTGAAGAGTGGAGTTCTCTTAGTGGATTGTACACAGCTGAGGAAGCTGACTTTATGACCCAACTGCTTGGAAACAACTGTACGGTCCCAGAGGAGCTGTTATATGAGAATCCCACTTTGGGATTTCCTTGTACATTTTGGCCTGGCCATGAATCAACAGTTGTGAGCGTCACAGGCATCAATACCAACAGCAATTCATATTTTCCTTCCGATGTTGCTAATTCTAATTTTTTCTGTTTCTCACAAGGGAGTAGCTCCAGTACTGATAGTGGAGTTAAATATTGCCCAAATGATGCATTGACCAATTTTGATTCTCTGTCCATGGGTTTTTCTTCGGGAGATGCCAAAATTGTCCCGTATAGTGTTGAAAGCAATGACCACTTAAGCCAGCTGATAAATGAAAACACTGATGAAGAGTCAGGTCTAGACCCAGTTAAGAGGGTTCTTGTTGTTGCTGACAAGAATTTGCAGGCTAATAGGGAATGTGAGATACTAGTTTCTGAACCAGCTGAAAAGGGTAAAAGCACCAATCTGAAGAACTCAGAGAAAAGATCTAGGTGCCCATTAGAGATCTCAAAAAACAAGAGGAATGTTAAACCAAAGAAGAATACAAAATCTGCTTCTGTAAGCAACAACCAAGAGGATAGAAGCTTTCAGAGGCAGAGCTCGAGCAGTTGCTGCTCAGAGGATGACTCCAGTGAGCTAAATGGGGGAGCTACTTCAAGTTTGAGTCCTAAAGATTCTACGTCTCTTAAGTCTAATGGCAAATCAATGTCTAGTAAAGGTCCTGCCACTGATCCTCAAAGCATATATGCAAGAAGAAGAAGGGAAAGAATAAATGAAAGGTTGAGAATCTTACAAAACCTTGTCCCCAACGGAACCAAGGTGGATATAAGCACCATGCTTGAGGAAGCCGTCCAATATGTGAAATTCTTGCAGCTACAAATTAAGCTTCTGAGCTCTGATGATCTGTGGATGTACGCTCCAATTGCTTACAATGGATTATACATTGGACTAGACCTCAATATCACACCAACCAAACAATCATAG 1071 0.4174 MEAAGRISEEWSSLSGLYTAEEADFMTQLLGNNCTVPEELLYENPTLGFPCTFWPGHESTVVSVTGINTNSNSYFPSDVANSNFFCFSQGSSSSTDSGVKYCPNDALTNFDSLSMGFSSGDAKIVPYSVESNDHLSQLINENTDEESGLDPVKRVLVVADKNLQANRECEILVSEPAEKGKSTNLKNSEKRSRCPLEISKNKRNVKPKKNTKSASVSNNQEDRSFQRQSSSSCCSEDDSSELNGGATSSLSPKDSTSLKSNGKSMSSKGPATDPQSIYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGLYIGLDLNITPTKQS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0459 356 MobiDBLite consensus disorder prediction 210 273 - -
Dere06g0459 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 270 336 IPR036638 GO:0046983
Dere06g0459 356 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 97 341 - -
Dere06g0459 356 MobiDBLite consensus disorder prediction 178 279 - -
Dere06g0459 356 FunFam Basic helix-loop-helix transcription factor 271 328 - -
Dere06g0459 356 SMART finulus 276 325 IPR011598 GO:0046983
Dere06g0459 356 MobiDBLite consensus disorder prediction 182 204 - -
Dere06g0459 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 270 319 IPR011598 GO:0046983
Dere06g0459 356 Pfam Helix-loop-helix DNA-binding domain 280 320 IPR011598 GO:0046983
Dere06g0459 356 Gene3D - 274 333 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0459 Dere-ChrDere06 7111718 7113500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0459 1 350 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 40.051 3.28e-62 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere06g0459 HLH 8e-09 No_clan