Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0452 ATGAGTTGCAGTGGTTGTCGTGTTCTTCGAAAAGGTTGCAGCGACGACTGCATGCTCCGGCATTGCCTTCAGGGCATAGAAGGCCTACAGGCCCAAGCCCACGCCACCGTCTTCGTAGCCAAGTTCTTCGGCCGCGCCGGCCTCATGTCCTTCGTCTCCGCCGTCCCTCCCGCCCAAAGACCCCCTCTGTTTCAGTCGTTGTTGTATGAAGCGGTGGGACGAACCATTTACCCAGTGAACGGAGCGGTGGGGCTTCTCTGGACAGGGAACTGGCACCTCTGCCAGTTGGGGGTCGAGACGGTGCTCCGCGGCGGCGCGTTGAGCCCACTGCCACCGGCCTTTATTATTATCGGTGGTGGCGAAGATGAGAGTTTTGGGTCTGCCGTGAACAGTTGTAATCGTCAACGAGACAATATGGGTGAAGGATCGTCGAGGATGTTAAATAGAAAGGTTGTTAGTGTTCCTATTTATGAGGTGGAGAATTTTCGAGCACACGATCAGATCACCTTGCCGGAGAGAGCGAAGAAGCTCGGAGCGGCGACGCCGTCCACCGAGGAGTCTGAAACGACATCGTTTGGAAGTAGCCCACAGGGATTTACCCGAAGGAAGCTCCTTAGACTATTCTTCTGA 630 0.5556 MSCSGCRVLRKGCSDDCMLRHCLQGIEGLQAQAHATVFVAKFFGRAGLMSFVSAVPPAQRPPLFQSLLYEAVGRTIYPVNGAVGLLWTGNWHLCQLGVETVLRGGALSPLPPAFIIIGGGEDESFGSAVNSCNRQRDNMGEGSSRMLNRKVVSVPIYEVENFRAHDQITLPERAKKLGAATPSTEESETTSFGSSPQGFTRRKLLRLFF 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0452 209 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 188 - -
Dere06g0452 209 MobiDBLite consensus disorder prediction 177 197 - -
Dere06g0452 209 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Dere06g0452 209 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Dere06g0452 209 MobiDBLite consensus disorder prediction 182 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0452 Dere-ChrDere06 6993928 6994783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0452 1 120 AS2 family AT5G67420 72.500 1.01e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere06g0452 LOB 1.2e-23 No_clan