Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0441 ATGACGAGTGCTTCGGAGCTATTTTACAATAGGAGGTATCGTTCGGGACGAACCGCTGACGATCTAGGGTTCGATTCGTTGCCCGGTCGACACCTTCACCCCGATTTCAATAACCGTCGCCATCATCACCATCTACATGATGTACGTGATGGTGAGACTCTCCGACGATCCACGCCTGTGCGGCGGCTATGTCACCGTTTATCCTACTTGGAGCGAGCATCAGCTAGATTTGACCTAAGAAATAGCCGGTCTCTTTCAAACACTGCCAATGCTGCAGAAAATATAAGCAATGTAGGAGGCCCTAGAGTGACTGGGAATGACAGGCTACCTATAGCTGTGGTACATGCGAGGGCAAGACTCCTTGAGAGGTTGAGTGGGGCACCTTCCTCTGGAAACAGGCAAATTGGTAGAGGCTCACTAAATATTGATGATATGAGGCATATTCACTTTGGTGACGAAGAGAACAGTGAATCATCAACTGCTGGCTTAGATGTGGGCTCCCCATTAGCCGACTTGACTTCCCTAATGGAAAGGTCGCAGCTCTTGCACGCAGTGAACAAGAAACCACCTGGACTCACCCGGGAGGCTATGAACTGTTTGCATATGGAAGTCTTTAGGAGCACGGAAACGAGATTGGAAGAATTGGAATCTAGGGTACTGCAGGATTGTGGCATATGCTTGGAAACTTTTGTGGATGGAGATGCACTGATACGCTTGCCATGTGGACACAGATTTCACTCTGCCTGTTTGGATCCATGGGTTCGAAAATGCGGGGACTGTCCATTCTGTAGAAGAGGTATAGTTGTGAATAGTCACATACCGTGTAATTTCTAG 834 0.4832 MTSASELFYNRRYRSGRTADDLGFDSLPGRHLHPDFNNRRHHHHLHDVRDGETLRRSTPVRRLCHRLSYLERASARFDLRNSRSLSNTANAAENISNVGGPRVTGNDRLPIAVVHARARLLERLSGAPSSGNRQIGRGSLNIDDMRHIHFGDEENSESSTAGLDVGSPLADLTSLMERSQLLHAVNKKPPGLTREAMNCLHMEVFRSTETRLEELESRVLQDCGICLETFVDGDALIRLPCGHRFHSACLDPWVRKCGDCPFCRRGIVVNSHIPCNF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0441 277 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 268 IPR013083 -
Dere06g0441 277 CDD RING-H2_PA-TM-RING 222 264 - -
Dere06g0441 277 SMART ring_2 223 263 IPR001841 -
Dere06g0441 277 ProSiteProfiles Zinc finger RING-type profile. 223 264 IPR001841 -
Dere06g0441 277 SUPERFAMILY RING/U-box 222 270 - -
Dere06g0441 277 PANTHER SI:CH211-59O9.10 18 269 - -
Dere06g0441 277 Pfam Ring finger domain 222 264 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0441 Dere-ChrDere06 6846282 6849123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0441 1 268 C3H Transcription Factor Family AT1G49850 39.194 3.51e-41 140