Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0440 ATGATGCATTCGTGCTATAGCATGTTGGAACGCTGCTTCGGTAGGCGTGGGGGCGGCAGCGACGGTCTTCTCTGGCACACGGACTTGAAGCCCCACGCCTCCGGCGACTTCTCCATCGCCGTCGCTCAGGCCAATTTCAGTCTCGAAGATCAGAGTCAGGTCTTCACGTCTCCCTCCGCCACCTACATCGGTGTCTACGATGGCCATGGCGGTCCCGAAGCTTCTAGATTCGTCAACAGACGCCTCTTTCCTTATTTACAGAAATTTGCCAATGAAAATGGGGGATTATCTGTGGATGTGATCAAGAAGGCGTTTTATGCTATTGAGGAGGATTTCTTGAAGTTGGTGAAGCGATCATTGCATATAAGTCCTCAAATTGCTTCTGTAGGATCTTGTTGTCTTCTTGGGGCAATATCTGATAATGTATTATATGTTGCGAACCTTGGAGACTCTAGAGTAGTTCTTGGCCGGAGAGCTTCGGAGGGCCATAAGCGTCAGGTGGTGGCACAGCGTTTGTCAACTGAACATAATGTAGCTATTGAAGAGGTGAGGAAAGAGGTTGAATCCCTCCATCCTGATGATGCACACATTGTGGTTTTTAGCCGTGGAACTTGGAGGATTAAGGGCATTATACAGGTGTCGAGATCTATTGGCGATGTGTATCTCAAGAACCCAGATTGTTACAGTGACCCACTGTTTCAGAAATTTGGAAACCCTATTCCTTTGAAGCGTCCTGTAATGACGGCTGAACCATCAGTCATTGTTAGGGAACTTGAGCCACAAGATTTATTTCTTATATTTGCATCAGATGGCCTCTGGGAACAACTAAGTGATGAAGCTGCAGTTGAGATTGTTTACAAATATCCAAGAGCAGGAATTGCCAAGAGATTGGTGAGAGCTGCTCTTCAGGAAGCTGCAAAGAAAAGAGAGATTAGATATGACGACATGAAGAAAATCAATAAGGGAGTAAGAAGACTGTTCCATGATGACATAACTGTTATTGTAATGTATCTTGATCACCAAAAGGGATCAAACTGTAAAGTTAAGAAAAATGTTCTTGGCTCCACGAGTGCCCCTATTGATATTTTCTCCCTAAATGCTGATGAAGCAGAACAGAGTATGCTCGGTGCAGCTGCCTGA 1140 0.4535 MMHSCYSMLERCFGRRGGGSDGLLWHTDLKPHASGDFSIAVAQANFSLEDQSQVFTSPSATYIGVYDGHGGPEASRFVNRRLFPYLQKFANENGGLSVDVIKKAFYAIEEDFLKLVKRSLHISPQIASVGSCCLLGAISDNVLYVANLGDSRVVLGRRASEGHKRQVVAQRLSTEHNVAIEEVRKEVESLHPDDAHIVVFSRGTWRIKGIIQVSRSIGDVYLKNPDCYSDPLFQKFGNPIPLKRPVMTAEPSVIVRELEPQDLFLIFASDGLWEQLSDEAAVEIVYKYPRAGIAKRLVRAALQEAAKKREIRYDDMKKINKGVRRLFHDDITVIVMYLDHQKGSNCKVKKNVLGSTSAPIDIFSLNADEAEQSMLGAAA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0440 379 CDD PP2Cc 49 338 IPR001932 -
Dere06g0440 379 Gene3D - 27 349 IPR036457 -
Dere06g0440 379 SMART PP2C_4 30 336 IPR001932 -
Dere06g0440 379 Pfam Protein phosphatase 2C 49 307 IPR001932 -
Dere06g0440 379 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Dere06g0440 379 ProSiteProfiles PPM-type phosphatase domain profile. 36 338 IPR001932 -
Dere06g0440 379 FunFam Probable protein phosphatase 2C 42 27 346 - -
Dere06g0440 379 PANTHER PROTEIN PHOSPHATASE 35 336 IPR015655 GO:0004722|GO:0006470
Dere06g0440 379 SUPERFAMILY PP2C-like 45 340 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0440 Dere-ChrDere06 6829147 6831239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0440 18 347 PP2C-type Phosphatase Gene Family AT3G51370 56.509 1.13e-138 398