Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0421 ATGAACAGAGAGAGGAACAGTGAAGGAAGTGAACATGAAAAAACAGAAGAGTGGTTGAACCTGAGTTTAGGAGGCACTCAGCTCTCAACAACAGCAGGAGACTCAGAATCACTTCCAAGAACACCATCTACTTCCAAAGTTTTCTCTTGCAACTTCTGCATGAGGAAGTTCTTTAGCTCACAAGCTTTGGGAGGCCACCAGAACGCCCACAAAAGAGAAAGAGGAGCAGCCAGAAGGTATAATCAGTCTCAGAAGATGATGACAATGATGGGGTTGTCCATGAACATTCCCATGTTTCGATCACTTGGAGTTCAGCCTCATTCACTGGTGCACAAGCCTTGCAGAGATGGAACAACAATGGTGACAAGTTTTCATGATGTTAATGGAAGGGTTGGAGTGGGATGGAATCCCTTCATGCCAGAGGATCAAACAGATCTCGTTTGGCCAGGCAGCTTTCGCTTGGATCAACAACAAGCCGACACACCAAAAGAGTCAATCAAGCTGGATTTAGACCTCCGACTCTGA 525 0.459 MNRERNSEGSEHEKTEEWLNLSLGGTQLSTTAGDSESLPRTPSTSKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYNQSQKMMTMMGLSMNIPMFRSLGVQPHSLVHKPCRDGTTMVTSFHDVNGRVGVGWNPFMPEDQTDLVWPGSFRLDQQQADTPKESIKLDLDLRL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0421 174 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Dere06g0421 174 PANTHER ZINC FINGER PROTEIN 4-LIKE 3 174 - -
Dere06g0421 174 Gene3D Classic Zinc Finger 34 95 - -
Dere06g0421 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Dere06g0421 174 SUPERFAMILY beta-beta-alpha zinc fingers 45 74 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0421 Dere-ChrDere06 6496192 6496716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0421 27 162 C2H2 Transcription Factor Family AT1G24625 40.426 6.00e-23 89.0