Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0416 ATGGAGGAGAACCAGGAATTTGAAGGCGACCTTTTGAATAAAGCGACTAGCTTCTCTGAGTTACTATACGGTGATGATGATGTGGGTATTGGTGTGGACCATCGCATCCTTCGCTGTTCGTCTGATTTCTCGACTTATAAGACACCCAAAATCCTCTGTTTTGATGGGGACTGTTTTGAAACCAACGAAACGCCTCAGAAATCTGTCGTCACTTCTTGTGACTCTTCCTCTGCTTCTTGCCTCAACTCCTTATCTATGTCTCATAATAAAAAGCGAAATGGGTCTGTGCTAGACACAGTTGGAGGCCATAAAAAGACCAGAGCAGAGAAAGCCACTTCAACGGGCCATGCAAAGAAGAGGAAAGAGAGGCTTGGTGAACGAATTGCAGCGTTGCAGAGGCTAGTTTCTCCCTTTGGCAAGACAGATGCAGCTTCGGTTCTTCACGAGGCCATGGGTTACATAAGATTTCTACACGACCAAGTTCAGGTTCTCTGCTCTCCATACCTGCAAGGCTTGCCTTCTTCACCCCACCACCACCATCATCACATTCACAGACCACAAGGGGACGTAGAAGAAAAAAGAGAAGCGAAGAAAGAACTGAGGAGCAGAGGGTTGTGCCTTATACCTGTGGAATGCACCATTAACGTGGCTAATAGCAACGGTGCTGATTTCTGGTTGCCAGCCATGGGCAACGACAATTAA 702 0.4687 MEENQEFEGDLLNKATSFSELLYGDDDVGIGVDHRILRCSSDFSTYKTPKILCFDGDCFETNETPQKSVVTSCDSSSASCLNSLSMSHNKKRNGSVLDTVGGHKKTRAEKATSTGHAKKRKERLGERIAALQRLVSPFGKTDAASVLHEAMGYIRFLHDQVQVLCSPYLQGLPSSPHHHHHHIHRPQGDVEEKREAKKELRSRGLCLIPVECTINVANSNGADFWLPAMGNDN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0416 233 Gene3D - 103 164 IPR036638 GO:0046983
Dere06g0416 233 MobiDBLite consensus disorder prediction 174 193 - -
Dere06g0416 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 110 169 IPR036638 GO:0046983
Dere06g0416 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 108 157 IPR011598 GO:0046983
Dere06g0416 233 FunFam Transcription factor bHLH113 101 171 - -
Dere06g0416 233 CDD bHLH_AtbHLH_like 117 164 IPR045239 -
Dere06g0416 233 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 67 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0416 Dere-ChrDere06 6453533 6455526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0416 82 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 45.578 5.20e-36 123