Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0387 ATGGAGGCGTTGCAGGGAGATGTGGATCGGGTCAAGGGTCCATGGAGTCCCGAGGAGGACGAGAAGTTGAAGATGCTCGTGGAACGGCACGGCGCTCGAAATTGGTCGGCGATTAGCAAGGCGATTCCCGGCCGCTCCGGCAAGTCGTGTCGGCTACGGTGGTGCAACCAGCTCTCGCCGGAGGTGGATCGCGGTGCTTTCACTCTCGAAGAGGACGAGATCATCGGCAAGGCACACGCCAAGTACGGCAACAAGTGGGCCACCATAGCCAAGTTCCTCAACGGCCGTACGGACAACTCCGTCAAGAACCATTGGAACTCGACCTTAAAGCGCAAGTACTCGTCCTTGATCAGCGACAGCGAAAGTCCCTCGCTCCAACCGACAAAGAAACAAGCCACCGCCGATCGATCTCCGGCGATTCCGTCGGTTTCAGCGGGCCAATGTTACAGTCCGAGTAGCCAATCTGGATCTGATGTGAGCGATTCAGGTCTACAGGTAGTCTCAAATTCTTCGACTCTGATTCGGCCTGTGGCGATAACTGGTACGATCTTCAACAACGAGCCGTCCACAGAACTCACTCTGTCTATTCCTGGAGCCAAGTCGAACGAGTTATGGAGGTTCAAAGATTCAGGAGCTATGGCAGACCATGAGAAGGCATTATCTGTATCGATATCATTATCGTCGGAGAAGAAGTGCAGTGGATTGACGACGTTTGGGCCAGAATTACTGTCAGTGATGAAGGAGATGATTAGGAATGAGGTGAAAAATTATATGGCGGCGCAATGA 786 0.5331 MEALQGDVDRVKGPWSPEEDEKLKMLVERHGARNWSAISKAIPGRSGKSCRLRWCNQLSPEVDRGAFTLEEDEIIGKAHAKYGNKWATIAKFLNGRTDNSVKNHWNSTLKRKYSSLISDSESPSLQPTKKQATADRSPAIPSVSAGQCYSPSSQSGSDVSDSGLQVVSNSSTLIRPVAITGTIFNNEPSTELTLSIPGAKSNELWRFKDSGAMADHEKALSVSISLSSEKKCSGLTTFGPELLSVMKEMIRNEVKNYMAAQ 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0387 261 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Dere06g0387 261 Pfam Myb-like DNA-binding domain 64 108 IPR001005 -
Dere06g0387 261 Pfam Myb-like DNA-binding domain 12 58 IPR001005 -
Dere06g0387 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 62 IPR017930 -
Dere06g0387 261 MobiDBLite consensus disorder prediction 116 163 - -
Dere06g0387 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 113 IPR017930 -
Dere06g0387 261 FunFam MYB transcription factor 12 63 - -
Dere06g0387 261 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Dere06g0387 261 CDD SANT 14 56 IPR001005 -
Dere06g0387 261 Gene3D - 65 139 - -
Dere06g0387 261 PANTHER MYB PROTEIN-RELATED 12 133 - -
Dere06g0387 261 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Dere06g0387 261 SMART sant 63 111 IPR001005 -
Dere06g0387 261 SMART sant 11 60 IPR001005 -
Dere06g0387 261 Gene3D - 11 63 - -
Dere06g0387 261 CDD SANT 66 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0387 Dere-ChrDere06 5788520 5789305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0387 7 259 MYB Transcription Factor Family AT4G37260 45.290 7.19e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere06g0387 Myb_DNA-binding 9.4e-18 CL0123