Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0376 ATGGCTTCCCACAATCATCACAATGAACGCCTCCAAGATTCTTCCTTTCTCCTTGATTCTCTCTACTGTCATGAACCCAGATGGGAAGAAGATGAAGAAGAAGAAGAAACAGCACAGGATGAAGGAGAGCTATCGCATGAAACTGACTTAACAAGAACTGATACTCCTCTGTTTCCTCTGCTTTTCTTGGAGCAAGACTTGTTCTGGGAAGACGAAGAGCTGATCTCTCTCTTCTCCAAAGAACAAAAACAACTACAGGAAGAAGCTTACTTCAGTCTGGGTAATGTGGGTTTTTCAGACTCTTCTCTCTCACTGGCTCGTCGTGACGCAGTGGAATGGGTTCTGAAAGTGAATGCCCATTATGGGTTCTCTGTTCTCACTTCAACTCTGGCCATAAATTACTTCGATAGATTCCTTTCGAACTTCAATTTTCAAAGAGAGAAGCCATGGATGATCCAGCTTGTGGCTGTCACTTGCCTCTCTTTAGCAGCAAAGGTTGAAGAGACCCAACTCCCTCATCTTCTAGACCTCCAAGTGGAGGATACGAAGTATGTGTTCGACGTCAAGACGATTCTGAGAATGGAGCTTCTGGTTCTTTCGACCCTCAAGTGGAAGATGCACCCAGTGACGCCATTATCGTTTCTAGATCACATCATAAGGAGGCTAGGGTTGAAAACACATCTTCACTGGCAATTTCTCAAGCGATGCGAGGATCTTCTTCTATCTGCACTCTCAGATTCAAGATTCGTTGGTTGTCTTCCTTCTGTGCTGGCCACTGCGACAATGATGCGTGTGATAGACCAGATAGAACACTACGATGGAGCAGAATATAAAAGACAGCTTCTAGATGTTCTTAAAATTAGCAAGGAGAAAGTAGAAGAGTGTTACAGAGCAATATTGGAATTCTGTGAGAAAAAAGGGGAAAGCAAGAGGAGGAAGAGAAAGTATGAGGACATCATCCGTGGAAGCCCAAGCGACGTCGTAATGGACGCTGCGTTTATATCTGAAGGTTCCAAGCATTCCTGGGAATCAGAGCCTTCTTCTTCGTCATCTTCATCTTCTCTCTTCATCAACAATAACAACAACAGCAACCCATCGCCTTGTCTGCACTCAATGGGGTCCTTGTCGCAGTTATTACCAACTCCACTTGAAAACATATGA 1161 0.4427 MASHNHHNERLQDSSFLLDSLYCHEPRWEEDEEEEETAQDEGELSHETDLTRTDTPLFPLLFLEQDLFWEDEELISLFSKEQKQLQEEAYFSLGNVGFSDSSLSLARRDAVEWVLKVNAHYGFSVLTSTLAINYFDRFLSNFNFQREKPWMIQLVAVTCLSLAAKVEETQLPHLLDLQVEDTKYVFDVKTILRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWQFLKRCEDLLLSALSDSRFVGCLPSVLATATMMRVIDQIEHYDGAEYKRQLLDVLKISKEKVEECYRAILEFCEKKGESKRRKRKYEDIIRGSPSDVVMDAAFISEGSKHSWESEPSSSSSSSSLFINNNNNSNPSPCLHSMGSLSQLLPTPLENI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0376 386 SUPERFAMILY Cyclin-like 210 319 IPR036915 -
Dere06g0376 386 FunFam CYCLIN D32 208 297 - -
Dere06g0376 386 CDD CYCLIN_AtCycD-like_rpt1 106 204 - -
Dere06g0376 386 Gene3D - 87 207 - -
Dere06g0376 386 Pfam Cyclin, C-terminal domain 209 317 IPR004367 -
Dere06g0376 386 PANTHER CYCLINS 49 309 IPR039361 -
Dere06g0376 386 Gene3D - 76 298 - -
Dere06g0376 386 SMART Cyclin_C_2 209 337 IPR004367 -
Dere06g0376 386 MobiDBLite consensus disorder prediction 28 49 - -
Dere06g0376 386 CDD CYCLIN_AtCycD-like_rpt2 209 299 - -
Dere06g0376 386 SMART cyclin_7 112 200 IPR013763 -
Dere06g0376 386 SUPERFAMILY Cyclin-like 68 207 IPR036915 -
Dere06g0376 386 MobiDBLite consensus disorder prediction 28 42 - -
Dere06g0376 386 FunFam D6-type cyclin 93 207 - -
Dere06g0376 386 Pfam Cyclin, N-terminal domain 79 206 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0376 Dere-ChrDere06 5622084 5624589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0376 12 302 Core Cell Cycle Gene Families AT4G34160 56.014 7.46e-112 330