Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0374 ATGGATTCAGTGTCTGCTGATACTTCTAATTTGCCTCATAGTAAAGATCACTCTGTTTCACCTTCTGTTAAAGATCCCGAAAGACAAGCTTCTGCTTCTGCAGTCTCTGCGCTAGATAATTCTGCCGATGAGACATCGCCTAGACTCTCGCCCACTGGCATATCATCTTGGGCCAAAAGTTTGAAAATTCCCCAGCCATTTTCTGGCTCTCAAGATGACTCATCTAGTGAAAATTCTGGGAAATCAACTTTTGCACGCTTTACAAGTAATCTAGCATCGCGGTTGTCTCCAAAATCATCTCCGTCAGATAACAATTCCCATGAAACTGCTGCTCAGTCTAATTTGATTGAAAGCATCACAAAAGGCCTGGTTGACTCTTCTAGGAATGCCGTGAAAGCTGTGCAGGTCAGGGCCCGACATGTTGTTTCACAGAATAAACGTCGTTACCAGGAGGGAGGATTTGATTTAGATATGACGTATATCACAGAAAATATTATTGCTATGGGATTCCCTGCTGGTGACATGAGCTCTGGGTTCTTTGGTTATGTAGAGGGGTTTTACAGAAATCATATGGAAGAAGTGATCAAGTTTTTTGAGACTCATCATAAGGGTAAATACAAAGTATACAATCTATGTTCTGAGCGGCTGTATGATGCATCATTGTTTGAGGGGAAGGTGGCTAGTTTTCCGTTTGACGACCATAATTGCCCACCAATGCAACTGATTATATCATTTTGTCAAAGTGCTTACTCATGGTTGAAGCAAGATATTGAGAATGTTGTGGTAGTCCACTGTAAAGCTGGAATGGCAAGGACCGGTTTGATGATTTCTAGTCTTCTATTATTCTTGAAGTTCTTTCCAACTGCTGAAGAGTCCATTGACTATTACAATCAGAAAAGGTGTTTTGATGGGAAAGGACTTGTTCTGCCTAGTCAGATTAGGTATGTCAAATATTTTGAACGTGTCTTGACTTACTTCAATGGCGAAAATCCTCCAGCTCGCAGGTGCATGCTTCGGGGATTCCGGCTTCACAGGTGCCCTTACTGGATCAGGCCTTCTATAACTGTCTCAGATCATACTGGTGTTTTGTTCTCAACCAAAAAGCATCCAAGAACCAAGGATCTTAATCCAGAAGATTTTTGGTTTAGTGCCCCAAAGAAGGGAGTGATGGTCTTTGCTTTGCCAGGGGAGCCTGGTCTTACAGAGTTGGCTGGAGACTTCAAAATTCATTTTCATGATCGTCAAGGAGATTTTTACTGTTGGTTGAATACAACTATGACTGAAAATAGGAAAGTATTGAACACTAACGATCTTGATGGTTTTGACAAGAGAAAGTTGCCTTCACCTGGATTTCTGGTTGAGGTTGTGCTGGTGGATTATGATGGCAATGTCACAACGTCCAAACCTGAAACTGTTACCAATAAATCAGATGAGAGGTCAAGTAGTAGTCCTGCCCCGGTTGATGCAAGCACCACAGCTCCCAATTCAGGCAAAGAGTCGAAGAATCATGATAAAGAAGATGATGTGTTTTCAGATGGCGAGGCAGAGGATTCGAATTCTTCTAGAAGCAGGCAGGCAAAAGCAGCTTCTGAAGCAGTTACTAATTCTACTACTGGTTCTGAGTCTAAAAGTTCGAATGAGATGACAAGTTTGACGCATGCAACGGAACAAGTTTCCTTGGGAAATACAAGCGTCACTCCAGTTCATAGTGCTGGTAAGCCAAAAAGTGATGATGCAAGAACAGTGTCCAATGTCGACGCTCCCAGCTCAGAAAGTGAATTCAAGGCGATGGCTGCAGATGCTTCTGTATTTACGTTTGGAGATGATGAAGACTACGAAAGTGAGTGA 1848 0.4242 MDSVSADTSNLPHSKDHSVSPSVKDPERQASASAVSALDNSADETSPRLSPTGISSWAKSLKIPQPFSGSQDDSSSENSGKSTFARFTSNLASRLSPKSSPSDNNSHETAAQSNLIESITKGLVDSSRNAVKAVQVRARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPMQLIISFCQSAYSWLKQDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIDYYNQKRCFDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHTGVLFSTKKHPRTKDLNPEDFWFSAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKVLNTNDLDGFDKRKLPSPGFLVEVVLVDYDGNVTTSKPETVTNKSDERSSSSPAPVDASTTAPNSGKESKNHDKEDDVFSDGEAEDSNSSRSRQAKAASEAVTNSTTGSESKSSNEMTSLTHATEQVSLGNTSVTPVHSAGKPKSDDARTVSNVDAPSSESEFKAMAADASVFTFGDDEDYESE 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0374 615 MobiDBLite consensus disorder prediction 24 111 - -
Dere06g0374 615 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 328 IPR029021 -
Dere06g0374 615 MobiDBLite consensus disorder prediction 1 111 - -
Dere06g0374 615 MobiDBLite consensus disorder prediction 464 594 - -
Dere06g0374 615 MobiDBLite consensus disorder prediction 1 17 - -
Dere06g0374 615 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
Dere06g0374 615 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 124 565 - -
Dere06g0374 615 ProSiteProfiles Phosphatase tensin-type domain profile. 147 326 IPR029023 -
Dere06g0374 615 MobiDBLite consensus disorder prediction 498 521 - -
Dere06g0374 615 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 132 329 - -
Dere06g0374 615 Gene3D Protein tyrosine phosphatase superfamily 132 329 IPR029021 -
Dere06g0374 615 MobiDBLite consensus disorder prediction 464 497 - -
Dere06g0374 615 MobiDBLite consensus disorder prediction 522 570 - -
Dere06g0374 615 ProSiteProfiles C2 tensin-type domain profile. 333 460 IPR014020 -
Dere06g0374 615 CDD PTP_PTEN 157 321 IPR045101 GO:0016791
Dere06g0374 615 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 240 300 IPR000387 GO:0016311|GO:0016791
Dere06g0374 615 SMART PTEN_C2_2 331 459 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0374 Dere-ChrDere06 5586959 5591515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0374 4 615 Protein tyrosine phosphatase (PTP) family AT3G19420 66.506 0.0 845