Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0373 ATGTTTGGAATCACGAGAGCTGGCAAAATGAGCCCCATCTCTTTCTATGTCGTTTCAATCTTACTATCTTCCTTCTTGCTTCACTCTCATTCAGCTTCTTCTCAAGAGCTTGCTCGCTCTGAAAGAGAGGCATTACAGATCGTCACAGGAGGAGGAGGAGACGATGACTACGTCCCTGCTCCTTCCCCTGAATACCAATACCCTCCCGCCTACTGCCCTCCTCCGCCGCCGCCAAAGCTGTCCCGGCTGGAGAAAGCACGGCGTGTGCTTCTGAAATTCGCCACCACAATCGACGACCCCAGTTGCTTTACCAGCGACTGGAAGGGTCCTGACCCCTGTAAATACAATGGTGTTGCATGTGCTTTTTATCCAAAATCAACAGAGAGAGCAGTTTCTGGATTAGACTTCAACCAAGCTGGCTTGTCTGGGCGTGGAGGTACGAAGTTGAACCTCACAGACATCCTGGGAATTCCAGAATTGACATTTTTCCATGTCAACTCCAACAACTTCACAGGAGCCGTCCCTACAGGAATCACAAAGTACCCATATTTCTTTGAGCTCGATTTGAGTAACAACAAGCTTGTGGGTAATTTTCCACGGGAAGTTCTTGCTTCTAAACAGCTAATTTTCTTAGATCTCAGGTTCAATTCTCTCACAGGGCCACTCCCACCAGAGCTCTTCTACATGGATCTCGACGTCATCTTCATCAACAACAACAATTTCTGCCAGAACCTCCCTTGGAATTTCGGGTTCACACCTGCTAGATTTCTCACATTCGCCAACAACAAGTTCACAGGGCCAATCCCCAGAAGTATAGGAAAAGCAGCAGAGACTCTGACGGAAGTACTCTTCTTGGGAAACCAGTTTTCTGGGTGTTTGCCTTACGAAATTGGGCTCCTAAAAAAGGCTGTAGTCTTCGATGTGAGCAAGAACTCATTGACGGGTCCAATCCCATGTTCGTTTGCTTGCTTGGAGAAGATTCGCTTCTTGAATTTGGCAAACAACAAATTCTACGGCCCTGTTCCGGAATCAGTCTGCGAGCTTCCTGGAATTCGCAATGATGGGAATCTATCCCTGTCGGGTAACTACTTCACCGCAGTGGGACCCGAATGTTGGAAGCTGATAAAGTCGAAGGTGCTTGATGTGAGCATGAATTGCATCAAGGGGCTTCCAAATCAGAGATCGCCACAGGAATGCCTTGAGTTTTTCGCTTGGGTGAAGCCATGTCCGAATTTCTGGTCCTTGACTTATGTTCCATGTAAGAAACACTATGCCACTACCCAACAAACGGCTTCGCTTCCACCCCCTGTGACTTACAAGTCTCTGGATCCGAAACCGCATCGATTGTGA 1350 0.4785 MFGITRAGKMSPISFYVVSILLSSFLLHSHSASSQELARSEREALQIVTGGGGDDDYVPAPSPEYQYPPAYCPPPPPPKLSRLEKARRVLLKFATTIDDPSCFTSDWKGPDPCKYNGVACAFYPKSTERAVSGLDFNQAGLSGRGGTKLNLTDILGIPELTFFHVNSNNFTGAVPTGITKYPYFFELDLSNNKLVGNFPREVLASKQLIFLDLRFNSLTGPLPPELFYMDLDVIFINNNNFCQNLPWNFGFTPARFLTFANNKFTGPIPRSIGKAAETLTEVLFLGNQFSGCLPYEIGLLKKAVVFDVSKNSLTGPIPCSFACLEKIRFLNLANNKFYGPVPESVCELPGIRNDGNLSLSGNYFTAVGPECWKLIKSKVLDVSMNCIKGLPNQRSPQECLEFFAWVKPCPNFWSLTYVPCKKHYATTQQTASLPPPVTYKSLDPKPHRL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0373 449 SUPERFAMILY L domain-like 85 388 - -
Dere06g0373 449 Pfam Leucine rich repeat N-terminal domain 86 120 IPR013210 -
Dere06g0373 449 Gene3D Ribonuclease Inhibitor 83 252 IPR032675 -
Dere06g0373 449 Gene3D Ribonuclease Inhibitor 253 417 IPR032675 -
Dere06g0373 449 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0373 Dere-ChrDere06 5564447 5567057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0373 82 437 Trihelix Transcription Factor Family AT1G12040 38.950 2.70e-77 253