Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0353 ATGCTTTCTCTCTCACTCCATTCACTCGGAGAGGCGAAGGAATTAGGGTTTTTACGAGAGACAGAAATGGAGCAAGCGCAGTCCCAATCGCTCGAGCAGGTTCAGTGCTTCGGCCGCAAGAAGACCGCCGTGGCCGTGACCTACTGTAAGCGCGGCCGTGGACTCATCAAGATCAATGGCTGTCCGATCGAACTGGTGGAGCCGGAGATTCTCCGATTCAAGGCAGTTGAGCCCATACTCCTATTGGGAAGGCAACGATTTGTTGGGGTCGACATGCGTATCCGTGTCAAGGGTGGTGGTCACACCTCGCAGATATACGCAATTCGCCAGAGCATAGCCAAAGCTCTCGTCGCTTTCTACCAGAAGTACGTTGATGAGCAGAGCAAGAAGGAGATCAAGGACATACTTGTCAGGTACGACAGAACACTGCTGGTCGCCGATCCAAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGTGGTGCCCGCGCAAGGTTCCAGAAGTCCTACCGTTGA 513 0.5458 MLSLSLHSLGEAKELGFLRETEMEQAQSQSLEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAVEPILLLGRQRFVGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0353 170 ProSitePatterns Ribosomal protein S9 signature. 98 116 IPR020574 GO:0003735|GO:0005840|GO:0006412
Dere06g0353 170 FunFam 40S ribosomal protein S16 26 170 - -
Dere06g0353 170 Pfam Ribosomal protein S9/S16 38 170 IPR000754 GO:0003735|GO:0005840|GO:0006412
Dere06g0353 170 SUPERFAMILY Ribosomal protein S5 domain 2-like 33 170 IPR020568 -
Dere06g0353 170 Gene3D - 23 170 IPR014721 -
Dere06g0353 170 PANTHER RIBOSOMAL PROTEIN S9 21 167 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0353 Dere-ChrDere06 5233423 5233935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0353 26 170 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 84.828 1.67e-90 258