Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere06g0348 | ATGTTACCCTTATGTTACTTCTCTCAATTGTCACTGGGATTTCAGGAATTGCTGGCATTGGAGGAGCGCATAGGAGATGTGTGCACTGGATTGAGTGAGGATAACATTATGAGGCTTGTCAATGACTGCATTTATTTTGTCCAACAATGGCAGGAGGAATATGCTGATGCAGAGGATGTAGCTTCACTAGATTGTGGACATGAATTCCACACCAACTGCATCAAGCAGTGGCTAATGCTGAAGAACCTGTGCCCCATTTGCAAAACAACAGTCTTAGCTACGTGA | 285 | 0.4386 | MLPLCYFSQLSLGFQELLALEERIGDVCTGLSEDNIMRLVNDCIYFVQQWQEEYADAEDVASLDCGHEFHTNCIKQWLMLKNLCPICKTTVLAT | 94 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere06g0348 | 94 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 41 | 93 | IPR013083 | - | |
Dere06g0348 | 94 | SUPERFAMILY | RING/U-box | 52 | 92 | - | - | |
Dere06g0348 | 94 | Pfam | RING-H2 zinc finger domain | 58 | 88 | IPR024766 | GO:0008270 | |
Dere06g0348 | 94 | ProSiteProfiles | Zinc finger RING-type profile. | 43 | 88 | IPR001841 | - | |
Dere06g0348 | 94 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 16 | 92 | IPR045191 | GO:0061630 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere06g0348 | Dere-ChrDere06 | 5110712 | 5111162 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere06g0348 | 11 | 94 | C3H Transcription Factor Family | AT2G15530 | 45.192 | 1.15e-25 | 97.1 |