Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0345 ATGTTACCCTTATGTTACTTCTCTCAATTGTCACTCAGATTTCAGGAATTGCTGGCATTGGGGGAGCCCATAGGAGATGTGTGCACTGGATTGAGTGAGGATAACATTATGAGGCTTGTCAATGACTGCATTTATTTTGTCCAACAATGGCAGGAGGAATATGCTGATGGAGAGGATGTAGCTTCACTAGATTGTGGACATGAATTCCACACCAACTGCATTAAGCAGTGGCTAATGCTGAAGAACCTGTGCCCCATTTGCAAAACAACAGCCTTAGCTACGTGA 285 0.4386 MLPLCYFSQLSLRFQELLALGEPIGDVCTGLSEDNIMRLVNDCIYFVQQWQEEYADGEDVASLDCGHEFHTNCIKQWLMLKNLCPICKTTALAT 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0345 94 SUPERFAMILY RING/U-box 52 91 - -
Dere06g0345 94 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 93 IPR013083 -
Dere06g0345 94 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 16 92 IPR045191 GO:0061630
Dere06g0345 94 Pfam Ring finger domain 52 88 IPR001841 -
Dere06g0345 94 ProSiteProfiles Zinc finger RING-type profile. 43 88 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0345 Dere-ChrDere06 5004323 5004773 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0345 11 94 C3H Transcription Factor Family AT2G15530 47.115 5.20e-27 100