Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0336 ATGCCTGTGAATTTAGAGCCGTTGGATGTAGGGGTTCAGATTCCATGCCACTTTATATGCCCCATCTCCCTCGACCTGATGCGCGACCCGGTTACTATATCCACGGTCTCGTCGGAGACGAGCTCCTCTCAGTCTCGCATCTCCGCTCTGCGACGCCTCAGAGGAGTCGCTCGTAACTCGGGCAAGAATTGTTGTCTACTTGGAGAGATTCTACTAGGTATCGTTTTCTGTAATTCTGGTTCGAATTGTTCCGAGTTGAAGCAGGAGTCGCTCGCACTTCTGGTGAATTCGACTCTCGCTGAATCTGAATGCGCCTCCATCGCATCGGAACCGGAGAGAATCAAGTATCTGTCGCGTTGGCTGTTTCATTCTTCTATCGACGTCCGTGTTAACTCGGCCGCACTGATTGAGATCGTCGTGGCCGGGACTCGGTCGCCGGAGCTGCAAGCACAAATCAGCAATGTCGATGAAATCTACGAAGGAGTGCTTGACATTTTGAGGAGTCCGATTTCGCACCCTCACGCTCTCATGATTGGGATCAAGGCCTTGTTCGCTCTGTGCCTGGTGAAACAGACACGACACAAAGCGGTCATCGCCGGAGTGCCGGAGGTCCTCATTGACCGGCTCGCTGATTTCGAGAAACGCGACGCCGAGAGAGCGCTGGCCACGATTGAGTTGCTCTGTCGAATTCCGGCGGGGTGCGCCGCATTTGCAGGGCACACGCTGACGGTGCCGCTGCTGGTGAAAATACTACTGAAGATATCGAACCGGGCGACGGAGCACGCAGCCGCGGCGCTGTTGTCGCTGTGCATGGGATCGGAGCAGTGCCAGAGGGAGGCGGTGGCGGCGCGTCTGTTGACGCGGCTGCTTTTACTGTTACAGAGTGAGTGCACGGAGAGAGCAAAGAGGAAGGCGCAGATGTTGCTGAAGCTTCTTCGGGATTCGTGGTCGCCAGAGTACGTCGGATTCTCTGAGGATACATGCACTCTGGTAGTACTACCGTATTGA 1008 0.5526 MPVNLEPLDVGVQIPCHFICPISLDLMRDPVTISTVSSETSSSQSRISALRRLRGVARNSGKNCCLLGEILLGIVFCNSGSNCSELKQESLALLVNSTLAESECASIASEPERIKYLSRWLFHSSIDVRVNSAALIEIVVAGTRSPELQAQISNVDEIYEGVLDILRSPISHPHALMIGIKALFALCLVKQTRHKAVIAGVPEVLIDRLADFEKRDAERALATIELLCRIPAGCAAFAGHTLTVPLLVKILLKISNRATEHAAAALLSLCMGSEQCQREAVAARLLTRLLLLLQSECTERAKRKAQMLLKLLRDSWSPEYVGFSEDTCTLVVLPY 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0336 335 Gene3D - 42 326 IPR011989 -
Dere06g0336 335 PANTHER WDSAM1 PROTEIN 12 35 IPR045185 GO:0061630
Dere06g0336 335 SUPERFAMILY ARM repeat 41 312 IPR016024 -
Dere06g0336 335 SUPERFAMILY RING/U-box 11 34 - -
Dere06g0336 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 41 IPR013083 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere06g0336 Dere-ChrDere06 4743544 4744776 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0336 1 35 U-box Gene Family AT1G49780 82.857 6.53e-13 67.4