Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0323 ATGTCTTCCTCCAAGCGATCCAAACTCGCCGGACCTCCGCCATCCTCCTCCTTCCCTCCTCCGCCGCCTACCTTCCTCTCCAACGACCACGAGCACTCCGTCATCGTCGCCGCACTCGCCAATGTCGTTGCAGGCTCCACCACCACCGATGCAGTATCCAACACCTCCTCCGCTGCAATCGGAACCAGCTCCGACCGAATAGTGTCGACCACGAGCATCGAGACTTGCGGCGAATGTAAAATCGAAGGGTGCTTGGGATGCAATTTTTTTCCGGAAGAGAAGAAAAATGGCGGGAGAAAAAGGACGAAGACGACGACAGCATCGTCATCGTCGGCGCCGGCGAAAAAGAAGTACAGAGGTGTGAGACAGAGGCCGTGGGGGAAATGGGCGGCGGAGATCCGAGATCCGAGACGAGCGACCCGGGTTTGGTTGGGAACGTTCAATACGGCGGAGGAAGCCGCACGCGCGTACGATAACGCGGCTATTGAATTTCGCGGACCCCGAGCGAAACTCAATTTTCCGTTTCCGGATAACTCGTTGAGTGACTCGCATTCGCACACAGAGCAAGTAGAAGTGGAACACACCGCAACGTTGGGGGAGGCAGAGGGGGGAAATGGAACTTCGAATTCCGGGAATTACTACGACGGTGTTTGGACGATGGGAATTGGGAATAATAAGGAAAATGAATTCTGGGATGGAATTGGAGACGCCGATTTTCAGCAGTGGATGACGATGATGATGGATTTTGGAGGGGATTCTTCAGACTCTGCGACTACAAATAGTCACAGTACCATGAGTTGGTGA 804 0.5423 MSSSKRSKLAGPPPSSSFPPPPPTFLSNDHEHSVIVAALANVVAGSTTTDAVSNTSSAAIGTSSDRIVSTTSIETCGECKIEGCLGCNFFPEEKKNGGRKRTKTTTASSSSAPAKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDNAAIEFRGPRAKLNFPFPDNSLSDSHSHTEQVEVEHTATLGEAEGGNGTSNSGNYYDGVWTMGIGNNKENEFWDGIGDADFQQWMTMMMDFGGDSSDSATTNSHSTMSW 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0323 267 SMART rav1_2 117 180 IPR001471 GO:0003700|GO:0006355
Dere06g0323 267 MobiDBLite consensus disorder prediction 95 121 - -
Dere06g0323 267 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
Dere06g0323 267 PRINTS Ethylene responsive element binding protein signature 140 156 IPR001471 GO:0003700|GO:0006355
Dere06g0323 267 PANTHER DNA-BINDING DOMAIN 69 200 IPR044808 GO:0003700|GO:0009873
Dere06g0323 267 SUPERFAMILY DNA-binding domain 117 175 IPR016177 GO:0003677
Dere06g0323 267 ProSiteProfiles AP2/ERF domain profile. 117 174 IPR001471 GO:0003700|GO:0006355
Dere06g0323 267 MobiDBLite consensus disorder prediction 1 27 - -
Dere06g0323 267 FunFam Ethylene-responsive transcription factor 2 116 175 - -
Dere06g0323 267 CDD AP2 118 174 IPR001471 GO:0003700|GO:0006355
Dere06g0323 267 Gene3D AP2/ERF domain 116 175 IPR036955 GO:0003700|GO:0006355
Dere06g0323 267 Pfam AP2 domain 117 166 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0323 Dere-ChrDere06 4592172 4592975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0323 6 259 AP2-EREBP Transcription Factor Family AT4G34410 40.000 7.40e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere06g0323 AP2 5.1e-16 CL0081