Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0286 ATGGCTAATATGCCTCATTCAAAGCAGGCCTTAGGCTGCTTCATCTTTAGCTCCCTCATTGTCTCTTCTCTTTCAACTTTAATCCCACCACTCTTAGAGGAAAGTGATCTTCCAGTAGATTATAAATTTGAAGTTGAACTTCATTTAACTTTTGACCATGAAAGGCTTAAGAAAGCCTATGTTGCTCTTCAGGCATGGAAAACTGTCGTATACTCTGACCCTTTGAACACACTTAGCAATTGGGAGGGTCCAGATGTTTGTTCTTACAATGGTGTGTTTTGTGCTCAAGCACTTGATGACCCTAAATTGACTGTTGTTGCTGGAATTGATCTTAACCATGCTGACATTGCTGGGCACCTTGTACCAGAGTTAGGTCTCTTGACGGACTTAGCCCTTTTTCACATTAACTCTAATAGGTTTTGTGGACTTGTCCCAAAGAGCTTCAAGCATCTCACTCTTATGCATGAGTTTGATATTAGCAACAACCGATTTGTTGGTGATTTTCCTTCTGTGGTCTTCCATTGGCCTAGCTTAAAGTACTTGGATATCAGATTCAATGACTTTGACGGACCTTTGCCTCCACGATTATTTGAGATAGACCTTGATGCATTGTTCCTAAATAATAATCGCTTTGTTTCTACTATCCCAGAAACCATAGGCAAATCCAAAGTCTCAGTTGTGACCTTCGCTAACAACAATTTCACAGGTTGCATTCCAAAATCGATTGGGAACATGGAGAACTTGAATGAGATTGTCTTCTTAGGCAATAACCTTGGAGGTTGCTTCCCACAAGGGATTGGAATATTAGGAAATATAACAGTTTTTGATGCTAGCCATAATGGGTTTATAGGGATTATGCCAAACTTGTCGGGTTTGAAGAGTGTGGAGGTTATAAACATTGCACATAATAAGATTTCTGGGTATGTGTCAGAAACCATTTGCAGGCTACCAATGTTGACCAACTTCACGTTCTCTGACAACTACTTTAATGGGGAAGCCCAAGCTTGTTTGCCTTCTTCAAAGGTGAATGTTGTTTTTGATGACAGCAACAATTGTTTGCCAATGAGGCCTAATCAAAGGACAAGCAAGCATTGCTTCCCAGTGGTGACTCGTCCTGTGGATTGTAGCAAGAATTGTGGTGGTGGGAGCAATGGCCATACCCCCTCAAAACCAAAGCCAACCCCAACACCTACACCTGTACCAAAGCCACCAAAGGCTGAATCACCTAAGCCTAAGACACCAAAGGTTGAGCCACCTCCAAAGCCAAAGGCCAACCCACCGCTGGTTCACTTTCCTCCACCCCTAATCCATTCTCCACCACCTCCAATCCATTCTCCCCCACCCCCAGTCCACTCCCCACCACCTCCAGTCCATTCCCCTGCGCCCCCAGTCCATTCCCCACCACCTCCAGTCCATTCCCCTCCGCCCCCAGTCCATTCCCCACCACCTCCAGTCCATTCCCCTCCGCCCCCAGTCCATTCCCCTCCACCCCCAGTCCATTCCCCACCACCCCCGGTTCACTCTCCTCCGCCACCCCATGTTCATCCATCACCACCCTTTGTCCACCCTCCTTTGCCCCCAGTCCAGTCTCTCTCACCCCCAGCTCACTCTTTCACGCCAATAGTCCAGTCTCCACCACCCTTAATTCACTCTCCACCTCCATTAGTCCACTTGTCGCCACCTATAGTTAACTCTCCACCACCCCAAGTTCACTCTCCCCCACTACTAGTCCAATCTCCACCTCCTCTAGTTCACTCTCCTCCACCGCCAGTCCAGTCTCCACCTCCCCCAGTTCACTCTCCTCCACCCCCAGTCCAATCTCCACCTCCCCCAATTCACTCTCCTCCACCCCCAATCCAATCTCCACCTGCCCCAGTTCACTCTCCTCCACCACCATTCCAGTCTCCATCACCCCCGATTCGTTCTCTCTCGCCACCGGTCCAGTCTACCCCACCCGTTATTCATTCTCCACCTCCATCAATCCACTCGCCACCACCCCCAGTTCACTTTCCTCTACCGAGAACCCAGTCTCTTCCTCCCCCGGTTTACTCTGCACCTCAATCAATCCACTCACCGCCACCTCCAGTACAATCTCCACCACCCCTAGTACATTCTCCTCCACCTCCTGTCCACTCCCCACCGCCACCAGTTCATTCTCCACCACCACCAGTCTCTTCACCACCACCCCCAGTTCTTTCACCTCCGCCCCCAGTCCGATCTCCACCTCCACCAGTCTCCTCACCACCACCCCACATCCAATCTCCACCTCCACCAGTTTTCTCTCCCCCACCGCCAATTAGTTCTCCTCCACCCCTTGTCCAATCTCCTCCTCCACTCGCATTCTCTCCCCCACCGCCAACTAACTCTCCTCCACCTGTCTTGTCCCCGCCACCACCAACATGGAATGACATCATCTTGCCCCCGACCTTTGGAGCCCAATATCGCTCACCACCTCCACCCGCCGTTGCTGGATACTAA 2478 0.5012 MANMPHSKQALGCFIFSSLIVSSLSTLIPPLLEESDLPVDYKFEVELHLTFDHERLKKAYVALQAWKTVVYSDPLNTLSNWEGPDVCSYNGVFCAQALDDPKLTVVAGIDLNHADIAGHLVPELGLLTDLALFHINSNRFCGLVPKSFKHLTLMHEFDISNNRFVGDFPSVVFHWPSLKYLDIRFNDFDGPLPPRLFEIDLDALFLNNNRFVSTIPETIGKSKVSVVTFANNNFTGCIPKSIGNMENLNEIVFLGNNLGGCFPQGIGILGNITVFDASHNGFIGIMPNLSGLKSVEVINIAHNKISGYVSETICRLPMLTNFTFSDNYFNGEAQACLPSSKVNVVFDDSNNCLPMRPNQRTSKHCFPVVTRPVDCSKNCGGGSNGHTPSKPKPTPTPTPVPKPPKAESPKPKTPKVEPPPKPKANPPLVHFPPPLIHSPPPPIHSPPPPVHSPPPPVHSPAPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPHVHPSPPFVHPPLPPVQSLSPPAHSFTPIVQSPPPLIHSPPPLVHLSPPIVNSPPPQVHSPPLLVQSPPPLVHSPPPPVQSPPPPVHSPPPPVQSPPPPIHSPPPPIQSPPAPVHSPPPPFQSPSPPIRSLSPPVQSTPPVIHSPPPSIHSPPPPVHFPLPRTQSLPPPVYSAPQSIHSPPPPVQSPPPLVHSPPPPVHSPPPPVHSPPPPVSSPPPPVLSPPPPVRSPPPPVSSPPPHIQSPPPPVFSPPPPISSPPPLVQSPPPLAFSPPPPTNSPPPVLSPPPPTWNDIILPPTFGAQYRSPPPPAVAGY 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0286 825 MobiDBLite consensus disorder prediction 418 804 - -
Dere06g0286 825 Gene3D Ribonuclease Inhibitor 58 357 IPR032675 -
Dere06g0286 825 SUPERFAMILY L domain-like 61 351 - -
Dere06g0286 825 PRINTS Proline rich extensin signature 430 442 - -
Dere06g0286 825 PRINTS Proline rich extensin signature 406 422 - -
Dere06g0286 825 PRINTS Proline rich extensin signature 391 403 - -
Dere06g0286 825 PRINTS Proline rich extensin signature 442 463 - -
Dere06g0286 825 MobiDBLite consensus disorder prediction 380 825 - -
Dere06g0286 825 MobiDBLite consensus disorder prediction 390 407 - -
Dere06g0286 825 Pfam Leucine rich repeat N-terminal domain 61 94 IPR013210 -
Dere06g0286 825 FunFam Leucine-rich repeat extensin-like protein 1 60 221 - -
Dere06g0286 825 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0286 Dere-ChrDere06 4182467 4184944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0286 11 424 Trihelix Transcription Factor Family AT3G19020 57.356 0.0 547