Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0268 ATGGGAGTTTGTACCTCCAAGCCACCGAAGCCGAACCCATATGCCGCTAGGCGGAAGGAAGAAGACCACGATCCGTATGACTCTTCCTCACAAATCCCGAAAACCCCTCTTACTCCTATTACCAACAACTACCACCACCATCGGAAAGATGACGTCGTTACCGGGAAGCAGTCTCCGTTTTTCCCTTTCAACAGTCCTAGTCCATTTCACTTTCTCAAGAAGTCTCCGGCACCGACGACGGGAGGGAGCAGGAGCGCGAGTTCGACGCCGAGGAGGTTTTTCCGGCGGCCTTTTCCTCCGCCGTCTCCGGCCAAACATATAAAGGCTGTGTTAGCGAGGAGGCAAGGGAAGAAGGCTGCGACGGCGATACCCGAAGAGGGGGAGGAAGAAGAATCGAGAGATTTGGACAAGAGGTTTGGCTTTTCGAAGGAGTTTACCAGTAGACTGGTGGTTGGGGAAGAAGTGGGCAGAGGGCATTTTGGGTATACGTGCTCTGCTAGGTACAAGAAAGGCGAATTCAAGGGTCAGCAAGTTGCTGTAAAGGTCATCCCTAAAGCCAAGATGACAACGCCAATTGCAATTGAAGATGTAAGAAGAGAGGTAAAAATATTACGAGCTTTGACTGGACACAAAAATGTGGTACAATTCTATGATGCATTTGAAGACCAAGATAATGTCTACATTGTAATGGAGTTATGTGAAGGAGGCGAGCTTTTAGATAGAATACTTTCAAGAGGAGGGAAATACTCAGAAGATGATGCAAAGGCTGTCATGGTACAAATACTAAATGTTGTTGCGTTTTGTCATCTTCAGGGTGTGGTGCACCGAGATCTTAAGCCAGAGAATTTTTTGTATACTTCAAAGGATGAAAATGCTGAATTGAAAGCTATTGACTTTGGGTTATCAGACTTTGTCAAACCAGATGAAAGGCTTAATGATATTGTTGGTAGTGCGTACTATGTGGCCCCTGAGGTTCTACATAGATCATACACTACAGAGGCTGATGTGTGGAGCATAGGCGTGATAGCATATATTCTTTTATGTGGTAGTCGTCCATTTTGGGCACGAACAGAGTCTGGTATTTTTAGGGCAGTTCTGAAGGCTGATCCAGGCTTTGATGAAACTCCTTGGCCTTCTTTATCTTCAGAAGCAAAAGATTTTGTCAAGCGCCTTTTAAATAAGGACCCACGGAAGCGATTATCAGCTGCTCAGGCCCTAAGTCATCCTTGGATGAGGAATTACAATAATGTAAAAGTTCCTCTTGATATTTTGATATTTAAGCTGATGAAGGCTTATATGCGATCATCATCATTGCGCAAGGCTGCCTTAAGGGCCTTGTCAAGGACATTGACTGCTGATGAGCTCTATTATCTGAGGGAGCAATTTGCTCTACTGGAGCCAAGCAAAAATGGCAGCATAACATTAGAAAACATCAGGATGGCGCTGACGAAACATGCAACAGATGCCATGAAAGAGTCCCGCATTTCTGATTTTATTGCCTCGCTAAATTCATTACAGTATAGAAGAATGGATTTTGAAGAATTTTGTGCAGCTGCATTAAGTGTGCATCAGCTTGAAGCTCTTGATCGATGGGAACAACATGCACGCTGTGCTTATGAAATTTTTGAGAAAGATGGAAACAGGGCTATTGTCATTGAAGAACTTGCTTCGGAACTTGGACTTGGTCCTTCTATCCCCGTTCATGTTGTGCTAGTTGACTGGATAAGGCACACTGATGGGAAGCTAAGCTTCCTTGGGTTTGTGAAATTGTTACATGGTGTATCTAGCCGAGCTCTTGCAAAAGCGCAATAA 1812 0.4459 MGVCTSKPPKPNPYAARRKEEDHDPYDSSSQIPKTPLTPITNNYHHHRKDDVVTGKQSPFFPFNSPSPFHFLKKSPAPTTGGSRSASSTPRRFFRRPFPPPSPAKHIKAVLARRQGKKAATAIPEEGEEEESRDLDKRFGFSKEFTSRLVVGEEVGRGHFGYTCSARYKKGEFKGQQVAVKVIPKAKMTTPIAIEDVRREVKILRALTGHKNVVQFYDAFEDQDNVYIVMELCEGGELLDRILSRGGKYSEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYTSKDENAELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYTTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPGFDETPWPSLSSEAKDFVKRLLNKDPRKRLSAAQALSHPWMRNYNNVKVPLDILIFKLMKAYMRSSSLRKAALRALSRTLTADELYYLREQFALLEPSKNGSITLENIRMALTKHATDAMKESRISDFIASLNSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYEIFEKDGNRAIVIEELASELGLGPSIPVHVVLVDWIRHTDGKLSFLGFVKLLHGVSSRALAKAQ 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0268 603 FunFam CDPK-related kinase 1 142 237 - -
Dere06g0268 603 SUPERFAMILY EF-hand 439 593 IPR011992 -
Dere06g0268 603 PANTHER SERINE/THREONINE-PROTEIN KINASE 133 571 - -
Dere06g0268 603 MobiDBLite consensus disorder prediction 13 28 - -
Dere06g0268 603 Pfam Protein kinase domain 151 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0268 603 Gene3D Transferase(Phosphotransferase) domain 1 239 433 - -
Dere06g0268 603 Gene3D - 434 593 - -
Dere06g0268 603 ProSiteProfiles Protein kinase domain profile. 149 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0268 603 MobiDBLite consensus disorder prediction 1 59 - -
Dere06g0268 603 ProSitePatterns Protein kinases ATP-binding region signature. 155 181 IPR017441 GO:0005524
Dere06g0268 603 FunFam CDPK-related kinase 3 141 313 - -
Dere06g0268 603 Gene3D Phosphorylase Kinase; domain 1 151 238 - -
Dere06g0268 603 FunFam Calcium-dependent protein kinase SK5 321 416 - -
Dere06g0268 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Dere06g0268 603 CDD STKc_CAMK 150 410 - -
Dere06g0268 603 SMART serkin_6 149 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0268 603 MobiDBLite consensus disorder prediction 119 135 - -
Dere06g0268 603 MobiDBLite consensus disorder prediction 71 135 - -
Dere06g0268 603 SUPERFAMILY Protein kinase-like (PK-like) 145 447 IPR011009 -
Dere06g0268 603 FunFam CDPK-related kinase 1 446 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0268 Dere-ChrDere06 3967306 3976361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0268 1 599 EF-hand Containing Proteins AT3G50530 70.266 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere06g0268 Pkinase 2.8e-72 CL0016