Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere06g0257 | ATGGTGGTTTCCAAGTCAACATACGAGGAATGCAGGCGTCAAAGGCTAGAAGAAAACAAGAAGAGAATGGAGGAGCTCAACCTCAACAAGCTTGCTAGCGCTTTAAAACCTTCACCATCACCCAAGCCTTCCCCTGCCAAGCCGAGGGCGCCACGTCAGCTAGTGAGCCCTTCTTCTGCTCCAGTAAGAAGGTCTAATCGCGTTGCCAGCTTACCTTCTCCAAACTACAAGGAAGTCCCACTTGAACCTTTGCAGAGACCACGAAGGTCCTATCAAAGAAGGGACCTGCTAAATCGAGTTTATGCTTCAGATGAAGTTAGGCAATATGCAATTGATAGAGCAGAAGAACTTCAATCTGGTTTAAATTCTAAATACCCAAGTTTTATCAAGCCTATGTTGCAATCACATGTTACTGGAGGATTTTGGCTAGGTCTCCCACTTCATTTCTGCAAAGATCATCTCCCTCACCATGATGAAACAATAACTTTAGTAGATGAGGATGGGAACGAGTCACCAACCAAGTACCTTGCTGATAGAACAGGTCTCAGTGGCGGTTGGCGAGGTTTTGCAATTGATCATGAACTAGTTGATGGGGATGCATTGGTGTTTCAATTGATCAAACCCACTAAATTTAAGGTGTTCATAATGAGAGCATATGAATCAGAAAACAAAGAGGAAAAAGATGAGGATTTGGATGCTACACACTTGAACAGGAGCTCCAAGAGGATCAGAGCAAGTAACTCCCTTTCATTGCTCTTTACTCTAATTACTTTGTTTCTGTGA | 783 | 0.4342 | MVVSKSTYEECRRQRLEENKKRMEELNLNKLASALKPSPSPKPSPAKPRAPRQLVSPSSAPVRRSNRVASLPSPNYKEVPLEPLQRPRRSYQRRDLLNRVYASDEVRQYAIDRAEELQSGLNSKYPSFIKPMLQSHVTGGFWLGLPLHFCKDHLPHHDETITLVDEDGNESPTKYLADRTGLSGGWRGFAIDHELVDGDALVFQLIKPTKFKVFIMRAYESENKEEKDEDLDATHLNRSSKRIRASNSLSLLFTLITLFL | 260 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere06g0257 | 260 | CDD | B3_DNA | 126 | 215 | IPR003340 | GO:0003677 | |
Dere06g0257 | 260 | ProSiteProfiles | B3 DNA-binding domain profile. | 128 | 219 | IPR003340 | GO:0003677 | |
Dere06g0257 | 260 | SUPERFAMILY | DNA-binding pseudobarrel domain | 121 | 217 | IPR015300 | - | |
Dere06g0257 | 260 | Coils | Coil | 13 | 33 | - | - | |
Dere06g0257 | 260 | SMART | B3_2 | 128 | 220 | IPR003340 | GO:0003677 | |
Dere06g0257 | 260 | Pfam | B3 DNA binding domain | 128 | 215 | IPR003340 | GO:0003677 | |
Dere06g0257 | 260 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - | |
Dere06g0257 | 260 | MobiDBLite | consensus disorder prediction | 8 | 27 | - | - | |
Dere06g0257 | 260 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED | 50 | 223 | IPR044837 | - | |
Dere06g0257 | 260 | MobiDBLite | consensus disorder prediction | 58 | 72 | - | - | |
Dere06g0257 | 260 | Gene3D | - | 104 | 221 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere06g0257 | Dere-ChrDere06 | 3806634 | 3807923 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere06g0257 | 1 | 254 | B3 DNA Binding Superfamily | AT3G19184 | 55.594 | 1.61e-89 | 265 |