Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0248 ATGTCTACTCCAACTCCCTTAATAAATTCCTTCGTAGCTGCTTCTTACTATTATCCCCACATTTGGCCATACCAGGCATTCAGCACTCCCCTTCAATATGATTCTCTGCATGATCCCAAAAGACTCAAGGATCATCCTACTATTGCTGGGGGTTCTACATTGACATTTTCAGATAAAGTACAAAGGACTAATATAAAGAACCTGGATTCGATAAAAACATATGATGGCAACTTACAACCTAGAAGTGTTGTATGTAATAAATTAAGAGAAAATGGTAACGAATTATCAATTTCCAAAAATGAGCGAGATGGAGCGACATTGAGTGCTGCAAGTGGAAGCATGGGTTCATCAGATGAAGGCCATGACACTAACAATGGTCATCCTCCAAGTATGAAGCAGCAATGTAACATGATGCTTGCAAATGGGGACGTTGCTCAGAATGTGGCTATAATGGAATGTAGCGCAAATAATGTGAATAAGAATTCTGCATTACGGCAATTTGCAGTGAATTCAACTGAACCGAATCTGAATCCAGGAACCTGCCTCAATGTGTCTGGGGCTTTTCGCCAACCTGCAAAAGCGGAAGAAGATGAAATAAAAAGAGAAAGAAAAAGGAAGTTAAATAGGGAATCAGCTAGGAGATCAAGGCTACGTAGGCAGCAAGAATGTGAAGAGCTACACAAAACTATGGATGCTCTTGCGAAGGAGAATTCCTTGCTCAAGGACAGGCTCATGAACCTTTCCGAGGACTGTCTAGTACTAAATAATGAAAACAACTCCATAGAGGAGGAGGTCGTCAAGATATATGGGCTTGAATCAATTGCTGATCTTGTAGCCATGAAGCCTGGCGGAGTAACTAGTTAA 864 0.4097 MSTPTPLINSFVAASYYYPHIWPYQAFSTPLQYDSLHDPKRLKDHPTIAGGSTLTFSDKVQRTNIKNLDSIKTYDGNLQPRSVVCNKLRENGNELSISKNERDGATLSAASGSMGSSDEGHDTNNGHPPSMKQQCNMMLANGDVAQNVAIMECSANNVNKNSALRQFAVNSTEPNLNPGTCLNVSGAFRQPAKAEEDEIKRERKRKLNRESARRSRLRRQQECEELHKTMDALAKENSLLKDRLMNLSEDCLVLNNENNSIEEEVVKIYGLESIADLVAMKPGGVTS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0248 287 PANTHER G-BOX-BINDING FACTOR 3-RELATED 16 267 IPR044827 GO:0003700|GO:0006355|GO:0043565
Dere06g0248 287 SMART brlzneu 196 260 IPR004827 GO:0003700|GO:0006355
Dere06g0248 287 SUPERFAMILY Leucine zipper domain 199 255 IPR046347 GO:0003700|GO:0006355
Dere06g0248 287 Coils Coil 200 220 - -
Dere06g0248 287 MobiDBLite consensus disorder prediction 95 130 - -
Dere06g0248 287 Coils Coil 223 264 - -
Dere06g0248 287 MobiDBLite consensus disorder prediction 193 218 - -
Dere06g0248 287 CDD bZIP_plant_GBF1 203 251 IPR045314 GO:0003700|GO:0006355
Dere06g0248 287 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 261 IPR004827 GO:0003700|GO:0006355
Dere06g0248 287 Gene3D - 189 266 - -
Dere06g0248 287 Pfam bZIP transcription factor 196 258 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0248 Dere-ChrDere06 3731535 3735551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0248 3 277 bZIP Transcription Factor Family AT4G36730 29.825 2.12e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere06g0248 bZIP_1 1.3e-13 CL0018