Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0242 ATGGCTGCCGAAGCACCGACAGAGAAGAGTCTTCAGGATTTTGATCCTCAAAAAAAACCCAAAAAGAACAAGTATGCTTTTGCTTGTGCCATTTTGGCCTCCATGACTTCCATCTTACTTGGTTATGATATAGGAGTGATGAGTGGAGCAGCGATATATATAAAAAGAGACCTGAAGGTGTCGGACGTGCAGATCGAGATCCTGTTGGGAATAATCAACCTGTACTCGCTGATAGGATCGTGCCTCGCCGGGCGGACCTCCGACTGGATAGGTCGGCGATATACAATCGTGCTGGCCGGAGCAATCTTTTTCGCCGGTGCTATTCTGATGGGATTCTCGACGAACTATGCCTTCCTGATGTGCGGTCGGTTCGTCGCAGGCATTGGAATCGGTTACGCCCTCATGATCGCCCCCGTCTACACCGCCGAGGTCTCGCCGGCTTCTTCTCGTGGCTTCCTCACTTCCTTCCCTGAGGTTTTCATCAATGGAGGAATACTTTTGGGATACATTTCAAACTATGCATTTTCCAAGCTGCCACTTCGCTTGGGCTGGCGGCTCATGTTGGGAATCGGCGCGGTTCCTTCGGTACTCCTAGCCGTGGGTGTCCTAGCCATGCCTGAGTCACCTCGCTGGCTCGTCATGCGCGGTCGGCTCGGCGAAGCCAGGCGAGTCCTGGACAAAACCTCCAACTCCAAAGAAGAGGCTCAGCTAAGGCTGGCCGACATCAAAGAAGCCGCCGGGATCCCCGAGACCTGCAACGACGACGTCGTTCAAGTGACCAAAAAGCAAAACATCGGCGAAGGCGTATGGAAAGAACTCTTCCTCCGTCCAACGCCAGCTGTCCGTCACATCCTGATCGCGGCCCTCGGAATCCACTTCTTCCAACAAGCCTCAGGCGTAGACGCCGTCGTTTTGTACAGCCCCACCATCTTTGAAAAAGCCGGCATCAAATCCGACACCCATAAGCTTCTCGCAACTGTAGCCGTCGGATTTGTCAAAACCATCTTCATCTTAGTGGCTACATTCTTGTTGGATCGGGTCGGGCGTCGCCCGTTACTGCTGACCAGTGTAGGGGGTATGATACTGTCGCTTCTAACCCTCGCCATGAGCCTCACGGTCATTGACCATTCTAACACGAAGCTAATGTGGGCCGTTGGATTGAGCATCGCCACGGTGTTATCGTACGTCGCGACGTTCTCGATCGGGGCAGGGCCCATCACATGGGTTTACAGCTCTGAGATCTTTCCGTTGAAGCTACGTGCTCAGGGTGCGGCTATGGGAGTGGTGGTGAATAGGGTGACGAGTGGGGTTATTTCAATGACATTTTTGTCCTTGCAGAAGGCTATCACTATAGGTGGGGCTTTCTTTCTGTTTGGGGCAATCGCAGCCGTTGGATGGATCTTCTTCTACATCATGCTGCCGGAAACACAGGGTAAAACCCTCGAAGAAATGGAAGGGTCTTTTGGTAGTTTTAGACGGAACTCTAGCTCCACCAAAGGAATTAGTGATAACCACAAGGGTAGTATTGGTAAAGAGAATGGCCAGATCCAATTAAGTTAG 1560 0.5205 MAAEAPTEKSLQDFDPQKKPKKNKYAFACAILASMTSILLGYDIGVMSGAAIYIKRDLKVSDVQIEILLGIINLYSLIGSCLAGRTSDWIGRRYTIVLAGAIFFAGAILMGFSTNYAFLMCGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKLPLRLGWRLMLGIGAVPSVLLAVGVLAMPESPRWLVMRGRLGEARRVLDKTSNSKEEAQLRLADIKEAAGIPETCNDDVVQVTKKQNIGEGVWKELFLRPTPAVRHILIAALGIHFFQQASGVDAVVLYSPTIFEKAGIKSDTHKLLATVAVGFVKTIFILVATFLLDRVGRRPLLLTSVGGMILSLLTLAMSLTVIDHSNTKLMWAVGLSIATVLSYVATFSIGAGPITWVYSSEIFPLKLRAQGAAMGVVVNRVTSGVISMTFLSLQKAITIGGAFFLFGAIAAVGWIFFYIMLPETQGKTLEEMEGSFGSFRRNSSSTKGISDNHKGSIGKENGQIQLS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0242 519 ProSitePatterns Sugar transport proteins signature 2. 125 150 IPR005829 GO:0016020|GO:0022857|GO:0055085
Dere06g0242 519 SUPERFAMILY MFS general substrate transporter 15 485 IPR036259 -
Dere06g0242 519 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 23 488 IPR045262 GO:0015144
Dere06g0242 519 Pfam Sugar (and other) transporter 29 486 IPR005828 GO:0016020|GO:0022857|GO:0055085
Dere06g0242 519 FunFam probable polyol transporter 4 19 491 - -
Dere06g0242 519 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 477 IPR020846 GO:0022857
Dere06g0242 519 NCBIfam sugar porter family MFS transporter 16 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere06g0242 519 ProSitePatterns Sugar transport proteins signature 1. 83 100 IPR005829 GO:0016020|GO:0022857|GO:0055085
Dere06g0242 519 CDD MFS_PLT 32 484 IPR044776 GO:0005351
Dere06g0242 519 Gene3D MFS general substrate transporter like domains 18 490 IPR036259 -
Dere06g0242 519 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere06g0242 519 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere06g0242 519 PRINTS Sugar transporter signature 120 139 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere06g0242 519 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere06g0242 519 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere06g0242 519 Coils Coil 225 245 - -
Dere06g0242 519 MobiDBLite consensus disorder prediction 490 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0242 Dere-ChrDere06 3629644 3632360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0242 3 506 Organic Solute Cotransporters AT3G18830 74.008 0.0 776