Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0224 ATGTATAAAGGCGTAGGTCGCATTCCACTGGTTTCGCCCTTCCTTTCTTTCTCTCCCCTACTGCACAAGGTGCAGTACGGGAGAGAATCTGCACTTCCAAGAGGCTCCTTTAATAATATCACCTTGATTGGAACTTGGAAGAAGGTCGTGACAATGGATTCAGCACCAATTTCGGATTCGGATCCGGAGTCCCCACCATCACCTTCATCTTCATCAAAATGGCCACCTTCACCTTCATCTTCATCAAAATCGCCGCCGTCACCTTCATCTTCATCAAAGTCGCCACCGTCACCTTCATCTTCATCAAAGTCGTCGCCGCCGCCACCACCGCCCTCATCGCCGCCGCCGTCACCGCCGCCACCATCAGATGATAAAAAATCAGCACCTCCTCCTACATTGTCCCCGCCACCGCCAACGCCATCGCCGCGGGACCAAAATTCCAACTCGTCACTTTCCCCACCACCAACACCACCTTCCGGCAACAGATCACCCAACCCATCGCTGCCACAACCACCAGTCTCGTCGTTCCGAACATCTGACCAAGGGCTTTTATCTCGACATAAACATCATCGAGTGTCTCCTCCGCCAGTGCAGGATTCAACACCAGCGTCGTCTGATTTAAACTCTGGTTCACCATCGTCAGGGAATGACGGGGCCCGTTTGAATCCAGCAGTTATGGGAATGGCGGCTGGAGTTGGCATATTGCTGGTTGCTATTACACTACTCGTCATTGCATATTTGAGAAAGAAGAAGAAATCAGGCCTTCCCCAATATGACTACAATAATAATGGAACAAATGCTGATGCCTATTACAAGTGTGCATCAATTTCAAATCATCAACAACATTGGAGTGGTGCGTACAAATACAATAGTGGTGAACAAATTCATATTACAACGCCATCTCCCCCCATGCCTAGTAGTACTGACTTGAGCAACTTTAGTTCTGGCACACAAAGTACCCCACGGCAACCCCCACAGCCTTTAGTAGCCCTTGGATTCCACAAGAGCAACTTCACATTCGATGAATTATCAGCTGCCACAGGAAACGGTCGACCTGTCATGGAATGGAGCACCAGGCTAAAAATTGCAATTGGATCAGCCAAAGGGCTTGCTTACTTGCATGAGGATTGTAACCCTCGTATTATTCACCGGGACATTAAGGCTGCAAACATTCTCATCCAAGACAACTTTGAAGCCAAGGTGGCAGATTTTGGATTGGCGAGGCTTAACCAAGACAACAACACTCATATATCTACTCGCGTAATGGGTACATTTGGGTATATGGCTCCTGATTATGCGTCAAGCGGTAAGCTGACTGAGAAGTCTGATGTCTTCTCATATGGTGTCATGCTCTTGGAGCTAATAACAGGAAGACGTCCTATAGACCTAACTGGTGATTGTGAAGATGAAAGTTTAGTTGAATGGGCTAGACCTCTTTGTACAAAGGCGTTGGAAAGTGGAAACTATGAAGGATTGGTGGATCCACGATTGGAGAACAATTATGAAAAGCAAGAGATGGCACGCATGGTGGCATGTGCTGCTGCCAGTGTTAGACGCTCGGCAAGGAAGAGACCAAAAATGAGCCAGATTGTTCGAGCTCTTGATGGTGCTGTCTCATTAGATGTTCTGAGTGAAGGGGTGAAACCTGGCCACAGTTCAATGTTTAGCAATACTAGTTCTGAATATGATGCTATCACATATAGAGCTGACATGGATAGGTTTAGAAAGCTAGCACTGGACAGTGGCTATGCAAGCAACAACTTTGGTGGGACAGGTGTGGATGAGCTTGATAACGAAACAAAAAGGGATTTATACTCATCTTGTGACACTGCATGTCCAGCTGTTGGGAGGGGCATATCAGTCAACTCAGGTCAATTGGTTTTGAGGTGGCACAATCTCGTTGTCCACTGGAGGGCATTTCCTTCTTCGTTCACCTCCCAAACTTCTGATTTCTGA 1956 0.4734 MYKGVGRIPLVSPFLSFSPLLHKVQYGRESALPRGSFNNITLIGTWKKVVTMDSAPISDSDPESPPSPSSSSKWPPSPSSSSKSPPSPSSSSKSPPSPSSSSKSSPPPPPPSSPPPSPPPPSDDKKSAPPPTLSPPPPTPSPRDQNSNSSLSPPPTPPSGNRSPNPSLPQPPVSSFRTSDQGLLSRHKHHRVSPPPVQDSTPASSDLNSGSPSSGNDGARLNPAVMGMAAGVGILLVAITLLVIAYLRKKKKSGLPQYDYNNNGTNADAYYKCASISNHQQHWSGAYKYNSGEQIHITTPSPPMPSSTDLSNFSSGTQSTPRQPPQPLVALGFHKSNFTFDELSAATGNGRPVMEWSTRLKIAIGSAKGLAYLHEDCNPRIIHRDIKAANILIQDNFEAKVADFGLARLNQDNNTHISTRVMGTFGYMAPDYASSGKLTEKSDVFSYGVMLLELITGRRPIDLTGDCEDESLVEWARPLCTKALESGNYEGLVDPRLENNYEKQEMARMVACAAASVRRSARKRPKMSQIVRALDGAVSLDVLSEGVKPGHSSMFSNTSSEYDAITYRADMDRFRKLALDSGYASNNFGGTGVDELDNETKRDLYSSCDTACPAVGRGISVNSGQLVLRWHNLVVHWRAFPSSFTSQTSDF 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0224 651 SUPERFAMILY Protein kinase-like (PK-like) 349 534 IPR011009 -
Dere06g0224 651 MobiDBLite consensus disorder prediction 197 218 - -
Dere06g0224 651 MobiDBLite consensus disorder prediction 151 171 - -
Dere06g0224 651 MobiDBLite consensus disorder prediction 68 93 - -
Dere06g0224 651 MobiDBLite consensus disorder prediction 54 218 - -
Dere06g0224 651 FunFam proline-rich receptor-like protein kinase PERK8 339 549 - -
Dere06g0224 651 Gene3D Transferase(Phosphotransferase) domain 1 341 544 - -
Dere06g0224 651 MobiDBLite consensus disorder prediction 100 143 - -
Dere06g0224 651 MobiDBLite consensus disorder prediction 299 324 - -
Dere06g0224 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 381 393 IPR008271 GO:0004672|GO:0006468
Dere06g0224 651 ProSiteProfiles Protein kinase domain profile. 201 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0224 651 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 348 577 IPR047117 -
Dere06g0224 651 Pfam Protein kinase domain 361 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0224 651 SMART serkin_6 307 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0224 Dere-ChrDere06 3120994 3127313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0224 348 588 Trihelix Transcription Factor Family AT1G70460 58.704 8.22e-93 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dere06g0224 Pkinase 4.1e-26 CL0016