Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0219 ATGAACCCATTCTCTTCTCTCTCTCCCTTCTTCCTTCCCCAACCTCTCTCCAATGCTCCAACCCTTTCTTACGATTTTCTCACCAACCAAACACTCCCAACTGCACTTTTCCTCTCGCACTTTCCCGAGAAAATTCTCACTCTAGCTCACTTCTCTTCTCTTCTCTACTGCTCGCACCCCATGTCAACGGCCTCCTCCGACGTTTCCTCCAGCAGTGCTCTGCATGAACTCACTAGCCCGACCCCGTTTCTGGGTTTAGAACTCTACATCGTCATATGCATTTTCCTCTTGATCTTGGTCGTTGTAGTGCTTATGATCTTCTTCTGCATTCGTCGGAATAGAAGCTCGACCAGGCCTAAAACGCTACCCAAGCACAGCTCCGGCACAATCCCGTTGGTCTCGAAGGAGATCGTGGAGGTTAAGGCCTTGGATCTTCTCGCTTGCGAGGAGAAAGAGCTTGAGCTTGAAGTTGGTGATTTGAGGAAGAAGGCGGAAGAAGAGGAGGTCAAGGTTGGAAACGGAAGAGGACGACGAGGGAGACAACTCGTCAAGGAGAGCGATGACGTGGCCGTCGTGGAGAGTCCGAGTATAGGGTGGGGCCGGTGGTATAGCCTGGAGGAGCTTCAGCTTGCGACACGTGGATTCGCCGACGAGAATGTGATCGGAGAAGGAGGCTATGGCATTGTGTACAGAGGTGTTCTTCAGGATCGTTCCGTGGTAGCTGTGAAGAATCTTCTAAACAACAAGGGTCAAGCAGAGAAGGAGTTTAAGGTGGAAGTTGAAGCCATTGGAAAAGCAAAGCATAAAAATTTGGTGGGTTTGGTAGGATATTGTGCAGAAGGTGCTCAAAGGATGCTTGTTTATGAATATGTTGACAATGGAAACTTGGAGCAGTGGTTGCATGGAGAAGTAGGGCCTGTTAGCCCGTTAACATGGGAAATTCGTACGAGGATTGCTATAGGGACAGCAAAAGGGCTAGCCTACTTGCACGAAGGGTTAGATCCCAAAGTTGTGCACCGAGACGTGAAATCCAGCAACATTCTTCTGGACAAAAGATGGAACGCCAAGGTATCAGACTTCGGACTTGCCAAGCTCTTAGGATCCGAGAAGAGCTACGTGTCTACACGCGTAATGGGGACATTCGGATATGTTTCGCCTGAGTATGCAAGCACAGGTATGCTGAATGAAGGTAGTGATGTGTATAGCTTCGGAGTTCTGTTAATGGAGATAATCACTGGAAGAAGTCCCATTGATTATTCTAGACCACCTGGAGAGATAAACTTGGTTGAGTGGTTCAAGGGAATGGTGGCAATTCGTCGTGGTGATGAGCTGCTAGATCCGTTGATTGAGACTCGACCCTCTCCCAGGTCTTTGAAGCGAGCTTTGCTGGTTTGTCTGCGTTGCATAGATATGGATGTTAGTAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGGCTGATGATTTCCCTTTTCGTTCTGAACTTCGTACAACTAGGGACAAGGATCATATTCCTTCTCATGCAGCTGTTTCCAGCAAAATTTCGTATCCACTGAAGCATGTGGAGTCAGTAGAACGATCAAGATGGAGATGA 1599 0.4809 MNPFSSLSPFFLPQPLSNAPTLSYDFLTNQTLPTALFLSHFPEKILTLAHFSSLLYCSHPMSTASSDVSSSSALHELTSPTPFLGLELYIVICIFLLILVVVVLMIFFCIRRNRSSTRPKTLPKHSSGTIPLVSKEIVEVKALDLLACEEKELELEVGDLRKKAEEEEVKVGNGRGRRGRQLVKESDDVAVVESPSIGWGRWYSLEELQLATRGFADENVIGEGGYGIVYRGVLQDRSVVAVKNLLNNKGQAEKEFKVEVEAIGKAKHKNLVGLVGYCAEGAQRMLVYEYVDNGNLEQWLHGEVGPVSPLTWEIRTRIAIGTAKGLAYLHEGLDPKVVHRDVKSSNILLDKRWNAKVSDFGLAKLLGSEKSYVSTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEINLVEWFKGMVAIRRGDELLDPLIETRPSPRSLKRALLVCLRCIDMDVSKRPKMGQIVHMLEADDFPFRSELRTTRDKDHIPSHAAVSSKISYPLKHVESVERSRWR 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0219 532 Pfam Protein kinase domain 216 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0219 532 ProSitePatterns Protein kinases ATP-binding region signature. 221 243 IPR017441 GO:0005524
Dere06g0219 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 337 349 IPR008271 GO:0004672|GO:0006468
Dere06g0219 532 FunFam Probable serine/threonine-protein kinase At1g01540 195 290 - -
Dere06g0219 532 SUPERFAMILY Protein kinase-like (PK-like) 196 487 IPR011009 -
Dere06g0219 532 FunFam Putative receptor-like serine/threonine-protein kinase 291 501 - -
Dere06g0219 532 Gene3D Transferase(Phosphotransferase) domain 1 291 499 - -
Dere06g0219 532 Gene3D Phosphorylase Kinase; domain 1 178 290 - -
Dere06g0219 532 SMART serkin_6 215 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0219 532 CDD STKc_IRAK 221 487 - -
Dere06g0219 532 ProSiteProfiles Protein kinase domain profile. 215 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0219 532 Coils Coil 143 170 - -
Dere06g0219 532 PANTHER OS01G0323000 PROTEIN 73 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0219 Dere-ChrDere06 3086487 3090754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0219 172 489 Trihelix Transcription Factor Family AT1G70460 48.447 1.10e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dere06g0219 Pkinase 1.8e-45 CL0016