Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0216 ATGGTGGATCGGCGAAGCGTAGTGTCTCTTGGGTTCCTGTTCTCGTTGCTGTTTCAGTTCACATTTGAACAGATTGTGCCTCTGAGTTCAACCATAGAGCGAGCTGCGCTCTTTGACCTCAGATCGTCTCTGGGCTTGAGGAGCAAGGAGTGGCCAAGAAAGGTCGACCCTTGCTCTTCCTGGAACGGCGTCACGTGCGCGAATGGTCGAGTCATTGGGGTCAATATTTCTGGGTTTAGGAGAACCCGAGTTGGGAGGCAAAACCCGCAATTTTCAGTCCAAGCCTTAACTAATTTGACTCTCTTGCAATCTTTCAATGCCTCTAATTTTCTGCTTCCTGGTCGTATTCCTGACTGGTTTGGCCAACAGCTCTCTTCCTTGAGAGTGCTTGATCTTCGGTCTTGCTCTGTCAGTGGTGCTATTCCTTCCACTCTAGGGAATTTAACCAACCTCACTAGTCTGTATTTGTCTGATAATAACCTTACTGGGATCATTCCTAATAGCCTGGGTCAACTCCTAAGCCTTTCAGTTCTTAACCTTTCGCGAAATTTACTTAATGGATCCATTCCAACATCATTTGCCTCTCTTGGGAATCTTTCTTCTCTGGACATTTCCACCAATATTTTGTCTGGCTCGATTCCTGCAGGCATTGGGGCCCTCACAAGGTTACAGTACTTGAATCTTTCCAGTAACAGTCTAATGTCTTCTATACCCTCTCAGCTGGGAGATCTCAGTAGCTTGGTTGAACTTGATCTTAGTTTTAATTCTTTGTCTGGTGTGGTGCCTCTAGAATTAGGAGGGCTGAGGAGCTTGCAGAGAATGATACTAGGGAACAACACGCTTGATGGACCTTTGCCGGGGAACTTGTTTTCTACTCTGTTGCAGTTGCAGTTCGTTGTGCTGAGAAAAAACAATTTTACTGGTGCTTTGCCTGCTGTGTTGTGGTCTCTTCCGAGATTGAGCTTCCTCGACCTCTCTGGCAATAACTTCACTGGCATGCTTCCAAATTCTAGTTCCAGTCCGAATGCTATTGCTGCTGAGCTTAATATTTCTGATAATATGTTTTATGGAAGCCTTAGTCCTATTCTTAGAAGGTTCAGTTTCATTGATCTGTCAAGCAATTATTTTGAGGGCAACATTCTGGATTTCATGCGCAATGTGTCTCTAAATACCAACTGCCTCCAAAACGTGTCAAATCAGAGGACTGCAGGGGAATGTGCATCGTTTTATGCTGAGAGGGGCCTAACTTTTGATAATTTTGGACGCCCAAATTCAACAGCACCTCCCACTGCAGAAAGCTCACGGAAGAGCAATAGAAAGAAGATTATATTGGCAGCAGTCTTGGGTGGCATTGGTTTAGCAGGAATTTTGTCGTTGCTACTGGTGTTATTGCTTCTTTATACTCGTAAGAGGGGTAATTCAAATCAAAGAGGGAATGGTGTGGGTCCTGCTCCTGCTGGGAGCAGTCCTCCACCTCCTGGGGTATCAATCAATTTTATAAATGTAGGAGATTCATTTACAATTCAGCAGCTGCTCCAGGCCACAGGTGATTTCAGTGATGCAAATCTTATTAAACATGGCCACACCGGGGATCTCTTCAACGGTACCATGGAAAGTGGTATCCCTGTAGTTATTAAAAGGATTGATGTGCGTTCAACTAAAAAAGATTCTTACCTAGTGGAACTGGACTTCTTCAGTAAGATTTCTCATACTAGATTTGTTCCCCTCCTGGGTCATTGCCTAGAAAATGAGAATGAGAAGTTCCTGGTTTATAAACATATGCCTAACGGGGACTTGTCAAATAGTTTGTACTACAAAAAAACTACATCTGAAGATGGTACTTTGCAATCATTGGACTGGATAACAAGATTGAAAATTGCTATTGGAGCAGCGGAGGCCCTATCTTATCTGCATCATGAGTGTAATCCACCCTTTGTTCATAGAAATATTCAAGCAAGCAGTATACTTCTTGACGATAAATTTGAAGTTCGGTTAGGGAGTCTAAGTGAAGTCTGCACGCAAGAAGGGGATAGTCATCAAAGCAAAATTACCAGGCTGCTAAGGTTGCCCCAGTCCTCTGAACCAGGCACATCTGGTTCATCAACATCAGTTTGTGCCTATGATGTTTATTGCTTTGGTAAAATATTGCTTGAGTTGGTGACCGGTAAGATGGGAATTAGTGCATCCAGTGATGCTGAATTGAAGGAATGGTTAGAACAGACGATACCGTACATAAGTATTTATGACAAGGAGCTTGTAGCTAAAATCGTGGATCCATCTATGGTTGTCGATGAGGATTTCTTAGAGGAAGTGTGGGCCGTGGCCATTGTTGCAAGGTCTTGCCTAAATCCAAAACCTTCAAGACGACCCCTTATGAGATATGTTCTCAAGGCTCTAGAAAACCCTTTAAAAGTTGTAAGGGAAGAAAGTGCTGGTTCTTCCCGGCTTAGAGCAACCTCTTCTAGAGGCTCTTGGAATGCTGCTTTGTTTGGTAGTTGGCGTCAGAGTTCATCTGATGTAACAGTAATCCCAGCAGCCTCTGGCACAAAAGCAGAAGGAGCGAGTAGTTTAAAGCATTCAGGAACTACTGGCTCGCAGGGTAGCCATAATGGTGGTAATTCATCGTCCCGAAGGCGACATTCGAAGGATATATTTCCAGAACCATCTAACATGCAAGACATAGAGAGGCCAGAGCAGGAATAG 2703 0.4399 MVDRRSVVSLGFLFSLLFQFTFEQIVPLSSTIERAALFDLRSSLGLRSKEWPRKVDPCSSWNGVTCANGRVIGVNISGFRRTRVGRQNPQFSVQALTNLTLLQSFNASNFLLPGRIPDWFGQQLSSLRVLDLRSCSVSGAIPSTLGNLTNLTSLYLSDNNLTGIIPNSLGQLLSLSVLNLSRNLLNGSIPTSFASLGNLSSLDISTNILSGSIPAGIGALTRLQYLNLSSNSLMSSIPSQLGDLSSLVELDLSFNSLSGVVPLELGGLRSLQRMILGNNTLDGPLPGNLFSTLLQLQFVVLRKNNFTGALPAVLWSLPRLSFLDLSGNNFTGMLPNSSSSPNAIAAELNISDNMFYGSLSPILRRFSFIDLSSNYFEGNILDFMRNVSLNTNCLQNVSNQRTAGECASFYAERGLTFDNFGRPNSTAPPTAESSRKSNRKKIILAAVLGGIGLAGILSLLLVLLLLYTRKRGNSNQRGNGVGPAPAGSSPPPPGVSINFINVGDSFTIQQLLQATGDFSDANLIKHGHTGDLFNGTMESGIPVVIKRIDVRSTKKDSYLVELDFFSKISHTRFVPLLGHCLENENEKFLVYKHMPNGDLSNSLYYKKTTSEDGTLQSLDWITRLKIAIGAAEALSYLHHECNPPFVHRNIQASSILLDDKFEVRLGSLSEVCTQEGDSHQSKITRLLRLPQSSEPGTSGSSTSVCAYDVYCFGKILLELVTGKMGISASSDAELKEWLEQTIPYISIYDKELVAKIVDPSMVVDEDFLEEVWAVAIVARSCLNPKPSRRPLMRYVLKALENPLKVVREESAGSSRLRATSSRGSWNAALFGSWRQSSSDVTVIPAASGTKAEGASSLKHSGTTGSQGSHNGGNSSSRRRHSKDIFPEPSNMQDIERPEQE 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0216 900 Gene3D Ribonuclease Inhibitor 29 213 IPR032675 -
Dere06g0216 900 Pfam Leucine rich repeat N-terminal domain 33 66 IPR013210 -
Dere06g0216 900 ProSiteProfiles Protein kinase domain profile. 518 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g0216 900 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 292 422 - -
Dere06g0216 900 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 30 189 - -
Dere06g0216 900 FunFam Leucine-rich repeat receptor protein kinase EMS1 190 288 - -
Dere06g0216 900 Gene3D Transferase(Phosphotransferase) domain 1 594 817 - -
Dere06g0216 900 Pfam Leucine rich repeat 149 207 IPR001611 GO:0005515
Dere06g0216 900 Pfam Leucine rich repeat 222 281 IPR001611 GO:0005515
Dere06g0216 900 MobiDBLite consensus disorder prediction 853 874 - -
Dere06g0216 900 Gene3D Ribonuclease Inhibitor 214 404 IPR032675 -
Dere06g0216 900 FunFam Putative LRR receptor-like serine/threonine-protein kinase 594 819 - -
Dere06g0216 900 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 94 199 - -
Dere06g0216 900 ProSiteProfiles Leucine-rich repeat profile. 150 171 IPR001611 GO:0005515
Dere06g0216 900 SMART LRR_typ_2 244 267 IPR003591 -
Dere06g0216 900 SMART LRR_typ_2 317 340 IPR003591 -
Dere06g0216 900 SMART LRR_typ_2 172 195 IPR003591 -
Dere06g0216 900 SMART LRR_typ_2 148 171 IPR003591 -
Dere06g0216 900 SMART LRR_typ_2 124 147 IPR003591 -
Dere06g0216 900 SMART LRR_typ_2 268 292 IPR003591 -
Dere06g0216 900 SMART LRR_typ_2 220 243 IPR003591 -
Dere06g0216 900 Pfam Protein tyrosine and serine/threonine kinase 524 796 IPR001245 GO:0004672|GO:0006468
Dere06g0216 900 SUPERFAMILY L domain-like 57 416 - -
Dere06g0216 900 FunFam Predicted protein 488 593 - -
Dere06g0216 900 SUPERFAMILY Protein kinase-like (PK-like) 493 799 IPR011009 -
Dere06g0216 900 Gene3D Phosphorylase Kinase; domain 1 497 593 - -
Dere06g0216 900 MobiDBLite consensus disorder prediction 850 900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0216 Dere-ChrDere06 3067272 3073185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0216 33 691 Miscellaneous Gene Families AT2G16250 58.797 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Dere06g0216 PK_Tyr_Ser-Thr 3.5e-19 CL0016