Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0215 ATGGCTTCTGCAGATGTTGAGTTCCGTTGCTTCGTTGGTGGGCTCGCATGGGCCACCGACAACGATGCCCTCGGCAAGGCCTTTGCTCCTTTCGGCGACATCATTGAATCGAAGGTTATCAACGATCGTGAGACTGGTAGGTCCAGAGGGTTCGGATTCGTTACCTTCTCGTCTGAGCAGTCTATGAGGGACGCGATCGAAGGCATGAATGGTCAGAGCATCGATGGCCGAAGCATTACGGTGAACGAGGCTCAGTCTCGTGGTGGTGGCGGAAGAGGCGGTGGTTACAGTAGCGGTGGCTACGGTAGCGGTGGCTATGGAGGCGGCGGGTACAACCGTGGCGGTGGAGGATTCGGAGGCGGTGGGCGCCGCGAGGGTGGATACAACAGGAACGGCGGTGGGGGATACGGCGGTGGTTATGGTGGTGGGCGTGACCGTGGGTATGGTGACGGTGGATCTCGCTACTCCAGGGGTGGCGATTCAGATGGAAGCTGGAGGAACTAA 504 0.5913 MASADVEFRCFVGGLAWATDNDALGKAFAPFGDIIESKVINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQSIDGRSITVNEAQSRGGGGRGGGYSSGGYGSGGYGGGGYNRGGGGFGGGGRREGGYNRNGGGGYGGGYGGGRDRGYGDGGSRYSRGGDSDGSWRN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0215 167 MobiDBLite consensus disorder prediction 70 99 - -
Dere06g0215 167 SUPERFAMILY RNA-binding domain, RBD 8 116 IPR035979 GO:0003676
Dere06g0215 167 Gene3D - 2 103 IPR012677 -
Dere06g0215 167 PANTHER GEO13361P1-RELATED 3 153 - -
Dere06g0215 167 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Dere06g0215 167 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Dere06g0215 167 MobiDBLite consensus disorder prediction 70 85 - -
Dere06g0215 167 SMART rrm1_1 9 82 IPR000504 GO:0003723
Dere06g0215 167 CDD RRM2_NsCP33_like 9 84 - -
Dere06g0215 167 MobiDBLite consensus disorder prediction 119 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0215 Dere-ChrDere06 3049820 3050589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0215 10 87 Eukaryotic Initiation Factors Gene Family AT2G23350 34.615 5.44e-07 46.6