Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0209 ATGAACTTATTTACAAGACGTTTAATTTATGTCCAAAGAAAAGAAGAAAGAAAAAAAGATTTGAAATGGAACCAGATTCATTTGAAACTGATTCGCCTCTCTGGCTGTACCTTGTCCTGCTTGGTTTTCGTGGTTCCAAAGCAGACGGGTCACAAGTGCTTTCCACCTTTTCACAGTTCAGATTCCCTCACTAACCCCAACCCCACTACCCTCTCGCCATTTATAAGCTCACCACCCTCACCATTCTCATCACAGTCATCTTCCTCACCACTTCTGACACACCACATATATAGCTCAGACCTCAGATTATCAGCCATGGCGTCCAGCTCTCTCAGCAGACAGAAGCCCTCTGATTCCTCTTGGACCCCAAAGCAGAACAAGATGTTTGAGAAGGCTCTTGCGAAGTATGATAAGGACACTCCTGATCGATGGCAGAATGTGGCCAGAGCTGTTGGTGGCAAATCTGCTGAAGAAGTTAAGAGACACTATGAGATCCTCTTGGAGGATCTTAGACACATCGAGTCTGGTCGTGTTCCCATCCCCAACTACAAATCCACTGGTACCACCAGCAATGCTGATGAAGAAGAGAGGCTTCTGAAGTATCTTAGGCTGAATTGA 618 0.4547 MNLFTRRLIYVQRKEERKKDLKWNQIHLKLIRLSGCTLSCLVFVVPKQTGHKCFPPFHSSDSLTNPNPTTLSPFISSPPSPFSSQSSSSPLLTHHIYSSDLRLSAMASSSLSRQKPSDSSWTPKQNKMFEKALAKYDKDTPDRWQNVARAVGGKSAEEVKRHYEILLEDLRHIESGRVPIPNYKSTGTTSNADEEERLLKYLRLN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0209 205 CDD SANT 120 167 IPR001005 -
Dere06g0209 205 Gene3D - 112 180 - -
Dere06g0209 205 ProSiteProfiles SANT domain profile. 116 171 IPR017884 -
Dere06g0209 205 FunFam Transcription factor SRM1 113 180 - -
Dere06g0209 205 Pfam Myb-like DNA-binding domain 119 163 IPR001005 -
Dere06g0209 205 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 106 193 IPR044636 GO:0003700
Dere06g0209 205 SUPERFAMILY Homeodomain-like 119 175 IPR009057 -
Dere06g0209 205 SMART sant 117 169 IPR001005 -
Dere06g0209 205 ProSiteProfiles Myb-like domain profile. 113 167 IPR001005 -
Dere06g0209 205 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0209 Dere-ChrDere06 2917450 2918395 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere06g0209 Myb_DNA-binding 3.2e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g0209 06 2917450 2918395 Dere06g0209 06 2917450 2918395 ECH
Dere06g0209 06 2917450 2918395 Dere13g0643 13 8054240 8054452 ECH
Dere06g0209 06 2917450 2918395 Dere09g0926 09 12259476 12260222 ECH