Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0196 ATGAAAAGATCCTTAAATTGGGCCTTGGACCAATTAATTGTTAGCCTCAGTCAACCCAAGAAGGGAAATGTTCATAGAAAGCCCAATGGGTTTTTCACAGAAAAAGGAACCCAATGCGAAACGACGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGCTGTTCATTCCGCATTATCCTTCTTATAAAACAAAAACCCTAGCACACCATTTCTGCCCTCGCCTCCATCTGCTTGTGCTGCTGCCCAGTCGAAGACCCTTCTTTCTCCGAACCCATACGATGGCTCCAAAGAAGGACAAGGCTCCTCCACCTTCCTCGAAACCCGCCAAGTCTGGTGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAGAAGGAGAAGGTTAACAACATGGTGCTGTTCGATCAGGCCACCTATGACAAGCTCTTGTCTGAGGCACCAAAATACAAGCTCATCACACCTTCCATCCTCTCTGATCGTTTGAGGATTAATGGATCACTGGCAAGGAAGGCCATAAGAGAGTTGATGGCTAGAGGCTCAATCAGGATGGTGTCTGCCCATGCAAGTCAGCAGATTTACACTAGGGCCACAAACACCTAA 603 0.5008 MKRSLNWALDQLIVSLSQPKKGNVHRKPNGFFTEKGTQCETTSGGGGGGGGGLFIPHYPSYKTKTLAHHFCPRLHLLVLLPSRRPFFLRTHTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVSAHASQQIYTRATNT 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0196 200 Pfam S25 ribosomal protein 100 197 IPR004977 -
Dere06g0196 200 Gene3D - 113 200 - -
Dere06g0196 200 MobiDBLite consensus disorder prediction 92 125 - -
Dere06g0196 200 FunFam 40S ribosomal protein S25 113 200 - -
Dere06g0196 200 MobiDBLite consensus disorder prediction 20 46 - -
Dere06g0196 200 PANTHER 40S RIBOSOMAL PROTEIN S25 93 200 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0196 Dere-ChrDere06 2743124 2745069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0196 93 199 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 93.458 6.62e-54 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g0196 06 2743124 2745069 Dere06g0196 06 2743124 2745069 ECH