Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0194 ATGGATTTTTTGGGTTGTGGGATAAATGTAGGGTTGCATGCTTCGAGTAGAATAAGTTTATGCACAAATTCGCCAGAACCGTCAAGATTAAACCCTAAAGCCTTTGTCCTTTTAGCTTCACAAGCGATTATAGCTCCTCCCAATGCGATGGACGTCGATATAGCTAGTTGGATACTGGAGTTTCTTCTTCGTAGTTCCATTCCAGATCGAATTGTCAAGAAAATTTTTATGCGTTTGCCACTTACTGGCCTCAATTTGCGGTTGCAGAAAACCTTACTTCTCAGAGGTATTAAATCTGAAGTGGATACGGCGTCGCTTTCAGAAACGGTATTGGAAAGTCTAGAGATTATCGAGGAGATAGACAGGGTTGATGGGACTGCGATCACGGAGGCGATGAAGGAGGCGTATTGCGCGGTTGCGGTGGAGTGTACCATCAGGTACCTTGAGGTGTCCCCGGTAGACAACAACAAGCACCGCGGTTTGTATCTTGACGCGGTCAAGAGGGTATGGAGGGGTCGGGTTCGGCAAATGGAGGTGGCGGCGGCATCGTGGGGTAAAACGAGTCAATTTTTTACTGCTGAGTTGATACAGTGGAGGCATGACATAGAGGCTGCGCTTTGGGACTCGAAGGTGTGTGATAGGTTAGCGAACACGAATGCCAGACGAAATGCACTCGACAAGGTTAGGGCTTATCTGGGAGAAACCTGGGCATTTATGGGCCCTTCTTTTCTTGAGTTAGCAGCTACATTGTCTGGAGCGACGGGTTTGTCTTCACATGTTTCTTGTGGGGATAAGATGAGTGATGTGCGTGGGGAGGTTGCAACAGATAAAACTGATGATGGTCGCGACAAAGGTGTTCCTGAATCTGTCTTGGCCTCTGATCATATGAAGGTGTGTGAAGGAAAATTACAGAGTTCAACTAAACCGATAGAGGGTTTAGTCGTGAGTGATAGAATTGAACTGGATAATGCTGCAATCTGCACGGCGAAGGCGCCAGTGGCAAGAGGGAATCGGGACAGTGAGCAATTCAAAGAGAGAGTTGTTCCTTTGGTTGATGGAAATCGGGAATTGGGTGGGACTGACTTGCCTCCAAAGATAGAGGGAGCAATTCAGAAGGGCAAGCTGCCACTTAAGCGTAAGAACACTGCATCCTGTACACGACATGGCGGAGTTAAAATCATTGATTCTGAGGAAGTGGGCCCAACAACACTGTGTGACGATCATGACCATGTGTCTAGTATACAAGTCAGAAAACTTCGGGAATCTCTTAAATCAAGTTCTTTGGAGTTGCAAGCATTGGTCAAGGATCCTCTTCCTGAAGCATTACATAAGTCTGACACTGTAAGATCTGAATTGGTGATGAAAGGCATTTCTTATGAGCCACCTCCTGAAAACCAGAGTACAGGTGTAAATGTACCAGAACCAAATACTTGCAGGAGCATTGTGCTTTATCAACCTATTGATGCTATTTTAAAAAGGCAGTCTTCTGATAATTGGAATATTGGTCATCGTCCCAGATTAATGGAACGAAATAGTACTGCCCATACTTATGAGTGGGATGATTCAATTGATAACTTGCCCGGGGGAACACCCAAGAAAAGAAGGAAAGTCAAAAGATGGAGTTCATTGGAAGAGGAGACGTTAAGGGCTGGTGTAAAGAAGTTTGGCAAAGGAAACTGGAAGTCAATCCTAAGTTTCTACCGTGAGATTTTTGAAAAGACAGAGAGAACTGAAGTCGATTTGAAGGACAAGTGGAGAAACATGACACGATAG 1773 0.4518 MDFLGCGINVGLHASSRISLCTNSPEPSRLNPKAFVLLASQAIIAPPNAMDVDIASWILEFLLRSSIPDRIVKKIFMRLPLTGLNLRLQKTLLLRGIKSEVDTASLSETVLESLEIIEEIDRVDGTAITEAMKEAYCAVAVECTIRYLEVSPVDNNKHRGLYLDAVKRVWRGRVRQMEVAAASWGKTSQFFTAELIQWRHDIEAALWDSKVCDRLANTNARRNALDKVRAYLGETWAFMGPSFLELAATLSGATGLSSHVSCGDKMSDVRGEVATDKTDDGRDKGVPESVLASDHMKVCEGKLQSSTKPIEGLVVSDRIELDNAAICTAKAPVARGNRDSEQFKERVVPLVDGNRELGGTDLPPKIEGAIQKGKLPLKRKNTASCTRHGGVKIIDSEEVGPTTLCDDHDHVSSIQVRKLRESLKSSSLELQALVKDPLPEALHKSDTVRSELVMKGISYEPPPENQSTGVNVPEPNTCRSIVLYQPIDAILKRQSSDNWNIGHRPRLMERNSTAHTYEWDDSIDNLPGGTPKKRRKVKRWSSLEEETLRAGVKKFGKGNWKSILSFYREIFEKTERTEVDLKDKWRNMTR 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0194 590 CDD SANT_TRF 538 590 - -
Dere06g0194 590 SMART sant 536 590 IPR001005 -
Dere06g0194 590 ProSiteProfiles Myb-like domain profile. 532 589 IPR001005 -
Dere06g0194 590 PANTHER MYB TRANSCRIPTION FACTOR 50 590 - -
Dere06g0194 590 Pfam Myb-like DNA-binding domain 539 588 IPR001005 -
Dere06g0194 590 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 532 590 IPR017930 -
Dere06g0194 590 SUPERFAMILY Homeodomain-like 534 589 IPR009057 -
Dere06g0194 590 Gene3D - 530 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0194 Dere-ChrDere06 2682508 2685898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0194 537 588 Single Myb Histone (SMH) Gene Family AT1G15720 51.923 2.41e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere06g0194 Myb_DNA-binding 5.1e-07 CL0123