Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0166 ATGGGCGACGTACGGCACGGTGGTTGTTGTCCACCGATGGATCTGTTCCGGTCGGAGCCGATGCAGCTGGTTCAGCTCATCATTCCCATGGAGTCCGCTCACCTCACTGTCTCCTATCTCGGCGACCTTGGCCTTCTTCAGTTCAAGGATCTTAACGTAGAGAAGAGCCCTTTTCAACGGACATATGCGAGTCAGCTAAAAAGATGTGGAGAGATGGCCCGCAAATTACGTTTTTTCAAGGAGCAAATGTTGAAGGCAGGTGTTTTGCCTAAAGGTTCTGCTACGCAAGCTGATTTAAACATTGATGATTTAGAGGTAAAACTTGCGGAGCTTGAGACAGAATTAACTGAGATGAATGCAAATGGTGAAAAGTTGCAACGCTCTCACAATGAACTCGTTGAATATAAGCTTGTTCTTCAGAAGGCTGGTGAGTTTTTTCGGTCAGCTCAAAATCATGCCTTGGAGCAGCAGAGAGAATATGAATCACGCCAACTGAGTGGAGACTCTATGGAAACACCATTATTACAGGACCAAGAATCATCAGCAGATTCATCAAAGCAAGTGAAGTTGGGGTTTCTGGCTGGTCTTGTTCCCAGGGAAAAATCCATGGCATTTGAGAGAATTTTATTTCGCGCTACTAGGGGCAATGTGTTTCTGAGGCAAGCCATTGTTGAGGATCCTGTCACAGACCCTGTTTCTGGAGAGAAGATTGAGAAAAATGTATTTTTGGTCTTTTATGCTGGTGAAAGAGCAAAAGCCAAGATTCTGAAAATATGTGAAGCCTTTGGAGCTAATCGTTACCCTTTTGCTGAGGAATCTGGAAAACAAGCTCAAATGATTGCAGAGGTTTCAGGAAGACTTTCAGAGTTGAAGACTACTGTAGATGCTGGACTGCTGCACCAGAGCCACTTACTGCACACTATTGGGGCTCAATTTAATCAATGGAATCTTTTGGTGAGAAAGGAGAAATCCATATATCATACCCTGAACATGCTTAGCCTTGATGTCACAAAAAAATGTCTCGTGGCTGAGGGGTGGAGTCCTGTTTTTGGAACAAAGCAGATACAAGATGCCTTGGAGCGTGCTGCATTTGACTCTAACTCCCAAGTTGGTGCCATTTTCCAAGTTTTGCATACAAGGGAGTCACCACCCACTTATTTCCGGACAAACAAATTCACTTCCTCATTTCAAGAAATTGTTGATGCATATGGGGTGGCTAAGTATCAGGAGGCTAATCCTGCTGTTTATACCATAGTTACCTTTCCATTTCTTTTTGCGGTAATGTTTGGTGATTGGGGGCATGGATTATGCTTACTATTGGCAACTTTGTATTTGATAGTGAGGGAGAAAAAGTTTTCTAGTCAGAAGCTTGGAGATATCATGGAGATGACTTTTGGAGGTCGTTATGTTATTTTGATGATGTCCATCTTCTCAATCTTCACTGGCTTGATCTATAATGAGTTCTTCTCTGTCCCATTTGAAATCTTTGGTCCCTCAGCATATGCATGCCGTGACCTTTCTTGCAGGGATGCAACTACTGTGGGCTTGATAAAAGTGCGTCGCACATACCCATTTGGAGTGGATCCTGTATGGCATGGTACACGAAGTGAATTGCCATTCCTGAACTCTTTGAAAATGAAAATGTCAATTCTTCTTGGGGTAGCTCAGATGAACCTTGGTATTATAATAAGCTTTTTCAATGCCAAATTCTTTGGCAACAGCTTGAATATATGGTTCCAATTTATTCCCGAGATTATATTTCTCAACAGTTTGTTTGGCTACCTATCGCTCCTTATCATTGTGAAGTGGTGCACTGGTTCCCAAGCTGATTTGTACCACGTAATGATCTACATGTTTCTTAGTCCTACAGATGATTTGGGAGAGAACCAGCTCTTTCCTGGGCAGAAAACTCTGCAGCTTACACTACTATTGTTGGCCTTTGTCTCTGTGCCCTGGATGCTGATCCCAAAACCTTTTCTTTTGAAGAAGCAACACGAAGATAGGCACCGGGGTGAATCCTATGCACTGCTTCAAAGCACAGAGGAGAGCTTGCAAGTGGAGTCAAATCATGATTCCCATGGTCATGGAGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTCATACATACCATTGAATTTGTACTTGGAGCAGTGTCTAATACAGCTTCTTACCTTCGTCTATGGGCGCTTAGTCTTGCTCATTCGGAGTTGTCAAGTGTATTCTATGAGAAGGTCCTTCTTCTTGCGTGGGGGTACAACAATGTGATCATACTAATAGTGGGTATCATCGTCTTTGTCTTCGCGACTGTCGGGGTGTTACTTGTGATGGAAACCCTCAGCGCCTTCCTCCATGCTCTGCGACTTCACTGGGTGGAGTTCCAAAATAAGTTTTATGAGGGAGATGGTTACTCATTCCATCCTTACTCGTTTTCTTTGCTAGATGACGAAGATGAGTGA 2460 0.4329 MGDVRHGGCCPPMDLFRSEPMQLVQLIIPMESAHLTVSYLGDLGLLQFKDLNVEKSPFQRTYASQLKRCGEMARKLRFFKEQMLKAGVLPKGSATQADLNIDDLEVKLAELETELTEMNANGEKLQRSHNELVEYKLVLQKAGEFFRSAQNHALEQQREYESRQLSGDSMETPLLQDQESSADSSKQVKLGFLAGLVPREKSMAFERILFRATRGNVFLRQAIVEDPVTDPVSGEKIEKNVFLVFYAGERAKAKILKICEAFGANRYPFAEESGKQAQMIAEVSGRLSELKTTVDAGLLHQSHLLHTIGAQFNQWNLLVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPVFGTKQIQDALERAAFDSNSQVGAIFQVLHTRESPPTYFRTNKFTSSFQEIVDAYGVAKYQEANPAVYTIVTFPFLFAVMFGDWGHGLCLLLATLYLIVREKKFSSQKLGDIMEMTFGGRYVILMMSIFSIFTGLIYNEFFSVPFEIFGPSAYACRDLSCRDATTVGLIKVRRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISFFNAKFFGNSLNIWFQFIPEIIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFPGQKTLQLTLLLLAFVSVPWMLIPKPFLLKKQHEDRHRGESYALLQSTEESLQVESNHDSHGHGEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNVIILIVGIIVFVFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYSFHPYSFSLLDDEDE 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0166 819 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Dere06g0166 819 PANTHER VACUOLAR PROTON ATPASES 15 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
Dere06g0166 819 Coils Coil 94 128 - -
Dere06g0166 819 PIRSF ATP6V0A1 11 819 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0166 Dere-ChrDere06 2209368 2217936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0166 13 819 Primary Pumps ATPases(2) AT4G39080 79.357 0.0 1331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g0166 06 2209368 2217936 Dere06g0166 06 2209368 2217936 ECH