Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0165 ATGTTGAGGGAATTAGGAGAAGAAGAAATAAGAAGAGGACCAAAGTGCGAAGACTGTGGGAACCAAGCCAAGAAGGGTTGCGAATTCATGAGATGCAGAACTTGCTGCAACAACAAAGGTTTTCGTTGCCAAACCCATATCAGAAGCACTTGGATTCCTTCCTGTAGGAGACGCCACCTTCAACCCCATGTCCCTCAAACCCTGTCACAAAATCCATCTTCAGGCTTAGAGGAGTTGAATAAATTTCCAGCTGCTACGAGCTCGATGGCAGTGTTTCGGTGCGTTCGAGTGCACTCTGAGGATGATTCAGTTGATGAATACGCCTACCAAACTTCTGTGAATATAGGGGGACGTGTGTTTAGTGGCGTTCTTTATGATCAAGGGCTTGAGAGCTTCTATTCTTCTACTGTTGGTGAAAGTTCCAAAGGCCCTCTGATTCACCAGTATCAGCACAGCCATATCAACACTTCAATTCAAACCCTCGATGCTGTAACTATGGCTCCATTGTCACCCTCTTCTGCTCACCATCTTTCTTCACCATATTTTTCTCAACCAAAGCCCTGGTAG 567 0.4568 MLRELGEEEIRRGPKCEDCGNQAKKGCEFMRCRTCCNNKGFRCQTHIRSTWIPSCRRRHLQPHVPQTLSQNPSSGLEELNKFPAATSSMAVFRCVRVHSEDDSVDEYAYQTSVNIGGRVFSGVLYDQGLESFYSSTVGESSKGPLIHQYQHSHINTSIQTLDAVTMAPLSPSSAHHLSSPYFSQPKPW 188
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0165 188 Pfam Domain of unknown function (DUF702) 78 130 - -
Dere06g0165 188 Pfam Domain of unknown function (DUF702) 14 70 - -
Dere06g0165 188 NCBIfam putative zinc finger domain, LRP1 type 15 57 IPR006510 -
Dere06g0165 188 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 12 166 IPR007818 GO:0003700|GO:0006355
Dere06g0165 188 NCBIfam LRP1 C-terminal domain 81 129 IPR006511 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere06g0165 Dere-ChrDere06 2183567 2184433 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0165 13 129 C2H2 Transcription Factor Family AT2G21400 53.731 1.55e-44 144
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Dere06g0165 DUF702 5.5e-19 No_clan