Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g0145 ATGAATAAAGAGGAGGTAGAGAACGTGCTTCCTTTGCTTGAAGGAGCTGCTGAAACTGGAAAGAAAAAGAGGAAGCCTCTCAAGAACTGGCTGGTAAAAGTTTACCTGGAGCACAAATCACTAGTGCATTCCTTAAACGATACAAAAACAGTTGTTGATGAGTTGAACAAGCTGGCTTCAGTGCTTGTGCTTGTAGTAATCATCATAGTTTGGTTGCTTTTGATGGGACTCTTAACAGCTAAATTACTTGTCTTCATTTCATCTAAGCTTTTAGTTGTTGTGTTCATGTTTGGCAACACAGCTAAAACTTTATTTAAGGCCATCATATTCGTCTTCATCATGCACCCTTTTGATGTCAGAGATCGTTGTGTCATTGATAGCATACAGTTGATAGTAGAAGAGATGAATATATTGACCACAGTGTTCTTGAGATATGATAACGAGAAGATATTCTATCCAAATTCAATTCTAGCAACCAAACTAGTCAGCAATTTTTACAGGAGCCCAGATATGAGTGATTCAGTTGAAATTACTATTGATGTTTCTACTTCTATGGAGACCATTGGTGCTTTGAAAGCTAGAATAAAAGCATACTTGGAGAGCAAGCCTTAG 612 0.3758 MNKEEVENVLPLLEGAAETGKKKRKPLKNWLVKVYLEHKSLVHSLNDTKTVVDELNKLASVLVLVVIIIVWLLLMGLLTAKLLVFISSKLLVVVFMFGNTAKTLFKAIIFVFIMHPFDVRDRCVIDSIQLIVEEMNILTTVFLRYDNEKIFYPNSILATKLVSNFYRSPDMSDSVEITIDVSTSMETIGALKARIKAYLESKP 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g0145 203 Pfam Mechanosensitive ion channel 56 203 IPR006685 GO:0016020|GO:0055085
Dere06g0145 203 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 1 203 IPR016688 -
Dere06g0145 203 FunFam Predicted mechanosensitive ion channel 116 165 - -
Dere06g0145 203 Gene3D - 116 165 IPR023408 -
Dere06g0145 203 SUPERFAMILY Sm-like ribonucleoproteins 106 165 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g0145 Dere-ChrDere06 1929656 1930267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g0145 1 203 Mechanosensitive Ion Channel Family AT5G12080 53.202 1.74e-77 244